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Jinwoo Leem
Jinwoo Leem
Associate Director of Data Science, Alchemab
Verified email at alchemab.com - Homepage
Title
Cited by
Cited by
Year
SAbDab: the structural antibody database
J Dunbar, K Krawczyk, J Leem, T Baker, A Fuchs, G Georges, J Shi, ...
Nucleic acids research 42 (D1), D1140-D1146, 2014
2892014
ABodyBuilder: Automated antibody structure prediction with data–driven accuracy estimation
J Leem, J Dunbar, G Georges, J Shi, CM Deane
MAbs 8 (7), 1259-1268, 2016
1332016
SAbPred: a structure-based antibody prediction server
J Dunbar, K Krawczyk, J Leem, C Marks, J Nowak, C Regep, G Georges, ...
Nucleic acids research 44 (W1), W474-W478, 2016
1102016
Observed antibody space: a resource for data mining next-generation sequencing of antibody repertoires
A Kovaltsuk, J Leem, S Kelm, J Snowden, CM Deane, K Krawczyk
The Journal of Immunology 201 (8), 2502-2509, 2018
1082018
STCRDab: the structural T-cell receptor database
J Leem, SHP de Oliveira, K Krawczyk, CM Deane
Nucleic acids research 46 (D1), D406-D412, 2018
472018
Structurally mapping antibody repertoires
K Krawczyk, S Kelm, A Kovaltsuk, JD Galson, D Kelly, J Trück, C Regep, ...
Frontiers in immunology 9, 1698, 2018
332018
Comparative analysis of the CDR loops of antigen receptors
WK Wong, J Leem, CM Deane
Frontiers in immunology 10, 2454, 2019
252019
Antibody side chain conformations are position‐dependent
J Leem, G Georges, J Shi, CM Deane
Proteins: Structure, Function, and Bioinformatics 86 (4), 383-392, 2018
192018
SCALOP: sequence-based antibody canonical loop structure annotation
WK Wong, G Georges, F Ros, S Kelm, AP Lewis, B Taddese, J Leem, ...
Bioinformatics 35 (10), 1774-1776, 2019
172019
Trapped platelets activated in ischemia initiate ventricular fibrillation
TS Dhanjal, RA Medina, J Leem, JE Clark, R Southworth, MJ Curtis
Circulation: Arrhythmia and Electrophysiology 6 (5), 995-1001, 2013
152013
Deciphering the language of antibodies using self-supervised learning
J Leem, LS Mitchell, JHR Farmery, J Barton, JD Galson
Patterns, 100513, 2022
132022
ABodyBuilder: automated antibody structure prediction with datadriven accuracy estimation. mAbs
J Leem
92016
Ten simple rules for surviving an interdisciplinary PhD
S Demharter, N Pearce, K Beattie, I Frost, J Leem, A Martin, ...
PLOS Computational Biology 13 (5), e1005512, 2017
82017
ABodyBuilder: Automated antibody structure prediction with data-driven accuracy estimation. MAbs 8, 1259–1268
J Leem, J Dunbar, G Georges, J Shi, CM Deane
72016
TCRBuilder: multi-state T-cell receptor structure prediction
WK Wong, C Marks, J Leem, AP Lewis, J Shi, CM Deane
Bioinformatics 36 (11), 3580-3581, 2020
62020
High-throughput antibody structure modeling and design using abodybuilder
J Leem, CM Deane
Computational Methods in Protein Evolution, 367-380, 2019
32019
AbDiver: a tool to explore the natural antibody landscape to aid therapeutic design
J Młokosiewicz, P Deszyński, W Wilman, I Jaszczyszyn, R Ganesan, ...
Bioinformatics 38 (9), 2628-2630, 2022
22022
Comparative analysis of the CDR loops of antigen
WK Wong, J Leem, CM Deane
Development of computational methodologies for antibody design
J Leem, CM Deane
University of Oxford, 0
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Articles 1–19