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Mariano Barbieri
Mariano Barbieri
(UMG) Univeristi Medicine Goettingen
Verified email at med.uni-goettingen.de - Homepage
Title
Cited by
Cited by
Year
Complex multi-enhancer contacts captured by genome architecture mapping
RA Beagrie, A Scialdone, M Schueler, DCA Kraemer, M Chotalia, SQ Xie, ...
Nature 543 (7646), 519-524, 2017
6872017
Complexity of chromatin folding is captured by the strings and binders switch model
M Barbieri, M Chotalia, J Fraser, LM Lavitas, J Dostie, A Pombo, ...
Proceedings of the National Academy of Sciences 109 (40), 16173-16178, 2012
5672012
Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation
J Fraser, C Ferrai, AM Chiariello, M Schueler, T Rito, G Laudanno, ...
Molecular systems biology 11 (12), 852, 2015
3732015
Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells
M Barbieri, SQ Xie, E Torlai Triglia, AM Chiariello, S Bianco, I de Santiago, ...
Nature structural & molecular biology 24 (6), 515-524, 2017
872017
Enhancer–promoter contact formation requires RNAPII and antagonizes loop extrusion
S Zhang, N Übelmesser, M Barbieri, A Papantonis
Nature genetics 55 (5), 832-840, 2023
652023
A polymer model explains the complexity of large-scale chromatin folding
M Barbieri, J Fraser, LM Lavitas, M Chotalia, J Dostie, A Pombo, ...
Nucleus 4 (4), 267-273, 2013
342013
Conformation regulation of the X chromosome inactivation center: a model
A Scialdone, I Cataudella, M Barbieri, A Prisco, M Nicodemi
PLoS computational biology 7 (10), e1002229, 2011
322011
Consortium F, Semple CA, Dostie J, Pombo A, Nicodemi M. Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation
J Fraser, C Ferrai, AM Chiariello, M Schueler, T Rito, G Laudanno, ...
Mol Syst Biol 11 (12), 852, 2015
222015
A model of the large-scale organization of chromatin
M Barbieri, M Chotalia, J Fraser, LM Lavitas, J Dostie, A Pombo, ...
Biochemical Society Transactions 41 (2), 508-512, 2013
212013
Polymer physics, scaling and heterogeneity in the spatial organisation of chromosomes in the cell nucleus
M Barbieri, A Scialdone, A Gamba, A Pombo, M Nicodemi
Soft Matter 9 (36), 8631-8635, 2013
202013
Polymer models of chromatin organization
M Barbieri, A Scialdone, A Piccolo, AM Chiariello, C di Lanno, A Prisco, ...
Frontiers in genetics 4, 113, 2013
162013
Inference of chromosome 3D structures from GAM data by a physics computational approach
L Fiorillo, S Bianco, AM Chiariello, M Barbieri, A Esposito, ...
Methods 181, 70-79, 2020
122020
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics
A Platania, C Erb, M Barbieri, B Molcrette, E Grandgirard, MA de Kort, ...
BioRxiv, 2023
92023
Polymer models of the organization of chromosomes in the nucleus of cells
AM Chiariello, S Bianco, A Piccolo, C Annunziatella, M Barbieri, A Pombo, ...
Modern Physics Letters B 29 (09), 1530003, 2015
92015
Mean-field theory of the symmetry breaking model for X chromosome inactivation
A Scialdone, M Barbieri, D Pallotti, M Nicodemi
Progress of Theoretical Physics Supplement 191, 40-45, 2011
42011
Multiwavelength frequency modulated CW ladar: the effect of refractive index
M Barbieri, DK Pallotti, M Siciliani de Cumis, L Santamaria Amato
Photonics 7 (4), 90, 2020
22020
Extreme structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs
T Xie, A Danieli-Mackay, M Buccarelli, M Barbieri, I Papadionysiou, ...
bioRxiv, 2023.04. 20.537702, 2023
12023
A feasibility study for self-heterodyne earth satellite dual-comb spectroscopy
L Santamaria, M Barbieri, D Pallotti, MS de Cumis
Optical Sensors 2021 11772, 143-147, 2021
12021
Pervasive structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs
T Xie, A Danieli-Mackay, M Buccarelli, M Barbieri, I Papadionysiou, ...
Nature Communications 15 (1), 3905, 2024
2024
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics
T Sexton, A Platania, C Erb, M Barbieri, B Molcrette, E Grandgirard, ...
Research Square, 2023
2023
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