| A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms H Tsugawa, R Nakabayashi, T Mori, Y Yamada, M Takahashi, A Rai, ... Nature methods 16 (4), 295-298, 2019 | 226 | 2019 |
| Improved batch correction in untargeted MS-based metabolomics R Wehrens, JA Hageman, F van Eeuwijk, R Kooke, PJ Flood, E Wijnker, ... Metabolomics 12, 1-12, 2016 | 209 | 2016 |
| Epigenetic Basis of Morphological Variation and Phenotypic Plasticity in Arabidopsis thaliana R Kooke, F Johannes, R Wardenaar, F Becker, M Etcheverry, V Colot, ... The Plant Cell 27 (2), 337-348, 2015 | 201 | 2015 |
| Marker-based estimation of heritability in immortal populations W Kruijer, MP Boer, M Malosetti, PJ Flood, B Engel, R Kooke, ... Genetics 199 (2), 379-398, 2015 | 172 | 2015 |
| Mapping the Arabidopsis metabolic landscape by untargeted metabolomics at different environmental conditions S Wu, T Tohge, Á Cuadros-Inostroza, H Tong, H Tenenboim, R Kooke, ... Molecular plant 11 (1), 118-134, 2018 | 119 | 2018 |
| Arabidopsis semidwarfs evolved from independent mutations in GA20ox1, ortholog to green revolution dwarf alleles in rice and barley L Barboza, S Effgen, C Alonso-Blanco, R Kooke, JJB Keurentjes, ... Proceedings of the National Academy of Sciences 110 (39), 15818-15823, 2013 | 93 | 2013 |
| Combined Use of Genome-Wide Association Data and Correlation Networks Unravels Key Regulators of Primary Metabolism in Arabidopsis thaliana S Wu, S Alseekh, Á Cuadros-Inostroza, CM Fusari, M Mutwil, R Kooke, ... PLoS genetics 12 (10), e1006363, 2016 | 77 | 2016 |
| Multi-dimensional regulation of metabolic networks shaping plant development and performance R Kooke, JJB Keurentjes Journal of experimental botany 63 (9), 3353-3365, 2012 | 75 | 2012 |
| Genome-wide association mapping and genomic prediction elucidate the genetic architecture of morphological traits in Arabidopsis R Kooke, W Kruijer, R Bours, F Becker, A Kuhn, H van de Geest, J Buntjer, ... Plant physiology 170 (4), 2187-2203, 2016 | 74 | 2016 |
| Effects of Multi-Generational Stress Exposure and Offspring Environment on the Expression and Persistence of Transgenerational Effects in Arabidopsis thaliana MP Groot, R Kooke, N Knoben, P Vergeer, JJB Keurentjes, NJ Ouborg, ... PloS one 11 (3), e0151566, 2016 | 64 | 2016 |
| Interactions between auxin, microtubules and XTHs mediate green shade-induced petiole elongation in Arabidopsis R Sasidharan, DH Keuskamp, R Kooke, LACJ Voesenek, R Pierik PLoS One 9 (3), e90587, 2014 | 48 | 2014 |
| Epigenetic mapping of the Arabidopsis metabolome reveals mediators of the epigenotype-phenotype map R Kooke, L Morgado, F Becker, H van Eekelen, R Hazarika, Q Zheng, ... Genome research 29 (1), 96-106, 2019 | 37 | 2019 |
| Genome-wide association mapping reveals that specific and pleiotropic regulatory mechanisms fine-tune central metabolism and growth in Arabidopsis CM Fusari, R Kooke, MA Lauxmann, MG Annunziata, B Enke, M Hoehne, ... The Plant Cell 29 (10), 2349-2373, 2017 | 37 | 2017 |
| Backcross populations and near isogenic lines R Kooke, E Wijnker, JJB Keurentjes Quantitative Trait Loci (QTL) Methods and Protocols, 3-16, 2012 | 29 | 2012 |
| Epigenetic variation contributes to environmental adaptation of Arabidopsis thaliana R Kooke, JJB Keurentjes Plant signaling & behavior 10 (9), e1057368, 2015 | 16 | 2015 |
| heritability: Marker-based estimation of heritability using individual plant or plot data W Kruijer, P Flood, R Kooke R. Available online at: http://CRAN. R-project. org/packages/heritability, 2016 | 14 | 2016 |
| A genetical metabolomics approach for bioprospecting plant biosynthetic gene clusters L Witjes, R Kooke, JJJ van der Hooft, RCH de Vos, JJB Keurentjes, ... BMC research notes 12, 1-5, 2019 | 9 | 2019 |
| Missing Heritability and Soft Inheritance of Morphology and Metabolism in Arabidopsis R Kooke PQDT-Global, 2014 | 2 | 2014 |
| Local adaptation shapes metabolic diversity in the global population of Arabidopsis thaliana R Kooke, W Kruijer, HDLM van Eekelen, FFM Becker, R Wehrens, ... bioRxiv, 2021.09. 13.460026, 2021 | 1 | 2021 |
| Mapping the Arabidopsis metabolic landscape by untargeted metabolomics at different environmental conditions. WS Wu Si, T Tohge, Á Cuadros-Inostroza, TH Tong Hao, H Tenenboim, ... | | 2018 |
