Karl Kochanowski
Karl Kochanowski
Researcher at IRTA-CReSA
Verified email at
Cited by
Cited by
The quantitative and condition-dependent Escherichia coli proteome
A Schmidt, K Kochanowski, S Vedelaar, E Ahrné, B Volkmer, L Callipo, ...
Nature biotechnology 34 (1), 104-110, 2016
Coordination of microbial metabolism
V Chubukov, L Gerosa, K Kochanowski, U Sauer
Nature Reviews Microbiology 12 (5), 327-340, 2014
A map of protein-metabolite interactions reveals principles of chemical communication
I Piazza, K Kochanowski, V Cappelletti, T Fuhrer, E Noor, U Sauer, ...
Cell 172 (1-2), 358-372. e23, 2018
Systematic identification of allosteric protein-metabolite interactions that control enzyme activity in vivo
H Link, K Kochanowski, U Sauer
Nature biotechnology 31 (4), 357-361, 2013
Functioning of a metabolic flux sensor in Escherichia coli
K Kochanowski, B Volkmer, L Gerosa, BR Haverkorn van Rijsewijk, ...
Proceedings of the National Academy of Sciences 110 (3), 1130-1135, 2013
Dissecting specific and global transcriptional regulation of bacterial gene expression
L Gerosa, K Kochanowski, M Heinemann, U Sauer
Molecular systems biology 9 (1), 658, 2013
Reserve flux capacity in the pentose phosphate pathway enables Escherichia coli's rapid response to oxidative stress
D Christodoulou, H Link, T Fuhrer, K Kochanowski, L Gerosa, U Sauer
Cell systems 6 (5), 569-578. e7, 2018
Pseudo-transition analysis identifies the key regulators of dynamic metabolic adaptations from steady-state data
L Gerosa, BRBH van Rijsewijk, D Christodoulou, K Kochanowski, ...
Cell systems 1 (4), 270-282, 2015
Few regulatory metabolites coordinate expression of central metabolic genes in Escherichia coli
K Kochanowski, L Gerosa, SF Brunner, D Christodoulou, YV Nikolaev, ...
Molecular Systems Biology 13 (1), 903, 2017
Somewhat in control—the role of transcription in regulating microbial metabolic fluxes
K Kochanowski, U Sauer, V Chubukov
Current opinion in biotechnology 24 (6), 987-993, 2013
Posttranslational regulation of microbial metabolism
K Kochanowski, U Sauer, E Noor
Current opinion in microbiology 27, 10-17, 2015
Regulation underlying hierarchical and simultaneous utilization of carbon substrates by flux sensors in Escherichia coli
H Okano, R Hermsen, K Kochanowski, T Hwa
Nature microbiology 5 (1), 206-215, 2020
Comparison of different approaches and computer programs for progress curve analysis of enzyme kinetics
M Zavrel, K Kochanowski, AC Spiess
Engineering in Life Sciences 10 (3), 191-200, 2010
Systematic identification of protein–metabolite interactions in complex metabolite mixtures by ligand-detected nuclear magnetic resonance spectroscopy
YV Nikolaev, K Kochanowski, H Link, U Sauer, FHT Allain
Biochemistry 55 (18), 2590-2600, 2016
Drug persistence–From antibiotics to cancer therapies
K Kochanowski, L Morinishi, SJ Altschuler, LF Wu
Current opinion in systems biology 10, 1-8, 2018
Distinct transcriptional regulation of the two Escherichia coli transhydrogenases PntAB and UdhA
BRBH van Rijsewijk, K Kochanowski, M Heinemann, U Sauer
Microbiology 162 (9), 1672-1679, 2016
Global coordination of metabolic pathways in Escherichia coli by active and passive regulation
K Kochanowski, H Okano, V Patsalo, J Williamson, U Sauer, T Hwa
Molecular systems biology 17 (4), e10064, 2021
Loss of TET2 affects proliferation and drug sensitivity through altered dynamics of cell-state transitions
L Morinishi, K Kochanowski, RL Levine, LF Wu, SJ Altschuler
Cell systems 11 (1), 86-94. e5, 2020
Stress-induced growth rate reduction restricts metabolic resource utilization to modulate osmo-adaptation time
AR Bonny, K Kochanowski, M Diether, H El-Samad
Cell Reports 34 (11), 108854, 2021
Systematic alteration of in vitro metabolic environments reveals empirical growth relationships in cancer cell phenotypes
K Kochanowski, T Sander, H Link, J Chang, SJ Altschuler, LF Wu
Cell reports 34 (3), 108647, 2021
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