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Kousik Kundu
Kousik Kundu
AstraZeneca, Cambridge, UK
Verified email at sanger.ac.uk
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Cited by
Year
The allelic landscape of human blood cell trait variation and links to common complex disease
WJ Astle, H Elding, T Jiang, D Allen, D Ruklisa, AL Mann, D Mead, ...
Cell 167 (5), 1415-1429. e19, 2016
11712016
Genetic drivers of epigenetic and transcriptional variation in human immune cells
L Chen, B Ge, FP Casale, L Vasquez, T Kwan, D Garrido-Martín, S Watt, ...
Cell 167 (5), 1398-1414. e24, 2016
6492016
The polygenic and monogenic basis of blood traits and diseases
D Vuckovic, EL Bao, P Akbari, CA Lareau, A Mousas, T Jiang, MH Chen, ...
Cell 182 (5), 1214-1231. e11, 2020
4262020
Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response
K Alasoo, J Rodrigues, S Mukhopadhyay, AJ Knights, AL Mann, K Kundu, ...
Nature genetics 50 (3), 424-431, 2018
2792018
A map of transcriptional heterogeneity and regulatory variation in human microglia
AMH Young, N Kumasaka, F Calvert, TR Hammond, A Knights, ...
Nature genetics 53 (6), 861-868, 2021
1352021
Freiburg RNA tools: a central online resource for RNA-focused research and teaching
M Raden, SM Ali, OS Alkhnbashi, A Busch, F Costa, JA Davis, ...
Nucleic acids research 46 (W1), W25-W29, 2018
1252018
Tumors induce de novo steroid biosynthesis in T cells to evade immunity
B Mahata, J Pramanik, L van der Weyden, K Polanski, G Kar, A Riedel, ...
Nature communications 11 (1), 3588, 2020
672020
MoDPepInt: an interactive web server for prediction of modular domain–peptide interactions
K Kundu, M Mann, F Costa, R Backofen
Bioinformatics 30 (18), 2668-2669, 2014
462014
Whole-genome sequencing association analysis of quantitative red blood cell phenotypes: The NHLBI TOPMed program
Y Hu, AM Stilp, CP McHugh, S Rao, D Jain, X Zheng, J Lane, ...
The American Journal of Human Genetics 108 (5), 874-893, 2021
442021
Genetic perturbation of PU. 1 binding and chromatin looping at neutrophil enhancers associates with autoimmune disease
S Watt, L Vasquez, K Walter, AL Mann, K Kundu, L Chen, Y Sims, S Ecker, ...
Nature communications 12 (1), 2298, 2021
362021
Semi-supervised prediction of SH2-peptide interactions from imbalanced high-throughput data
K Kundu, F Costa, M Huber, M Reth, R Backofen
PloS one 8 (5), e62732, 2013
362013
Immune disease variants modulate gene expression in regulatory CD4+ T cells
L Bossini-Castillo, DA Glinos, N Kunowska, G Golda, AA Lamikanra, ...
Cell genomics 2 (4), 2022
322022
Cohort-wide deep whole genome sequencing and the allelic architecture of complex traits
A Gilly, D Suveges, K Kuchenbaecker, M Pollard, L Southam, ...
Nature communications 9 (1), 4674, 2018
322018
Mitochondrial DNA variants modulate N-formylmethionine, proteostasis and risk of late-onset human diseases
N Cai, A Gomez-Duran, E Yonova-Doing, K Kundu, AI Burgess, ZJ Golder, ...
Nature medicine 27 (9), 1564-1575, 2021
312021
Genetic associations at regulatory phenotypes improve fine-mapping of causal variants for 12 immune-mediated diseases
K Kundu, M Tardaguila, AL Mann, S Watt, H Ponstingl, L Vasquez, ...
Nature genetics 54 (3), 251-262, 2022
292022
Cluster based prediction of PDZ-peptide interactions
K Kundu, R Backofen
BMC genomics 15, 1-11, 2014
292014
Exome-wide association study to identify rare variants influencing COVID-19 outcomes: Results from the Host Genetics Initiative
G Butler-Laporte, G Povysil, JA Kosmicki, ET Cirulli, T Drivas, S Furini, ...
PLoS genetics 18 (11), e1010367, 2022
272022
GRIN3B missense mutation as an inherited risk factor for schizophrenia: whole-exome sequencing in a family with a familiar history of psychotic disorders
T Hornig, B Gruening, K Kundu, T Houwaart, R Backofen, K Biber, ...
Genetics Research 99, e1, 2017
242017
A graph kernel approach for alignment-free domain–peptide interaction prediction with an application to human SH3 domains
K Kundu, F Costa, R Backofen
Bioinformatics 29 (13), i335-i343, 2013
242013
Whole-exome sequencing identifies rare genetic variants associated with human plasma metabolites
L Bomba, K Walter, Q Guo, P Surendran, K Kundu, S Nongmaithem, ...
The American Journal of Human Genetics 109 (6), 1038-1054, 2022
192022
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