CLIP and complementary methods M Hafner, M Katsantoni, T Köster, J Marks, J Mukherjee, D Staiger, J Ule, ... Nature Reviews Methods Primers 1 (1), 1-23, 2021 | 193 | 2021 |
Structure of SRSF1 RRM1 bound to RNA reveals an unexpected bimodal mode of interaction and explains its involvement in SMN1 exon7 splicing A Cléry, M Krepl, CKX Nguyen, A Moursy, H Jorjani, M Katsantoni, ... Nature Communications 12 (1), 428, 2021 | 46 | 2021 |
Kö ster M Hafner, M Katsantoni T., Marks, J., Mukherjee, J., Staiger, D., Ule, J., and Zavolan, M, 1-23, 2021 | 7 | 2021 |
Extensible benchmarking of methods that identify and quantify polyadenylation sites from RNA-seq data S Bryce-Smith, D Burri, MR Gazzara, CJ Herrmann, W Danecka, ... RNA 29 (12), 1839-1855, 2023 | 5 | 2023 |
Improved analysis of (e) CLIP data with RCRUNCH yields a compendium of RNA-binding protein binding sites and motifs M Katsantoni, E van Nimwegen, M Zavolan Genome Biology 24 (1), 77, 2023 | 5 | 2023 |
ZARP: An automated workflow for processing of RNA-seq data M Katsantoni, F Gypas, CJ Herrmann, D Burri, M Bak, P Iborra, K Agarwal, ... bioRxiv, 2021.11. 18.469017, 2021 | 3 | 2021 |
Computational models to infer regulators of gene expression for high-throughput data M Katsantoni University_of_Basel, 2023 | | 2023 |
Alternative Splicing: Evaluation of Isoform Functionality M Katsantoni Biozentrum, Universität Basel, 2016 | | 2016 |