Anaïs F Bardet, PhD
Anaïs F Bardet, PhD
IGBMC, CNRS, Strasbourg, France
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Competition between DNA methylation and transcription factors determines binding of NRF1
S Domcke, AF Bardet, P Adrian Ginno, D Hartl, L Burger, D Schübeler
Nature 528 (7583), 575-579, 2015
YAP1 exerts its transcriptional control via TEAD-mediated activation of enhancers
C Stein, AF Bardet, G Roma, S Bergling, I Clay, A Ruchti, C Agarinis, ...
PLoS genetics 11 (8), e1005465, 2015
B7‐H3 is a potent inhibitor of human T‐cell activation: no evidence for B7‐H3 and TREML2 interaction
J Leitner, C Klauser, WF Pickl, J Stöckl, O Majdic, AF Bardet, DP Kreil, ...
European journal of immunology 39 (7), 1754-1764, 2009
Sensitivity of transcription factors to DNA methylation
É Héberlé, AF Bardet
Essays in biochemistry 63 (6), 727-741, 2019
High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species
Q He, AF Bardet, B Patton, J Purvis, J Johnston, A Paulson, M Gogol, ...
Nature genetics 43 (5), 414-420, 2011
A computational pipeline for comparative ChIP-seq analyses
AF Bardet, Q He, J Zeitlinger, A Stark
Nature protocols 7 (1), 45-61, 2012
Genome-wide analysis in the mouse embryo reveals the importance of DNA methylation for transcription integrity
T Dahlet, A Argüeso Lleida, H Al Adhami, M Dumas, A Bender, ...
Nature communications 11 (1), 3153, 2020
A Histone Deacetylase Adjusts Transcription Kinetics at Coding Sequences during Candida albicans Morphogenesis
D Hnisz, AF Bardet, CJ Nobile, A Petryshyn, W Glaser, U Schöck, A Stark, ...
PLoS genetics 8 (12), e1003118, 2012
Identification of transcription factor binding sites from ChIP-seq data at high resolution
AF Bardet, J Steinmann, S Bafna, JA Knoblich, J Zeitlinger, A Stark
Bioinformatics 29 (21), 2705-2713, 2013
Cis-regulatory requirements for tissue-specific programs of the circadian clock
ACA Meireles-Filho, AF Bardet, JO Yáñez-Cuna, G Stampfel, A Stark
Current Biology 24 (1), 1-10, 2014
TFmotifView: a webserver for the visualization of transcription factor motifs in genomic regions
C Leporcq, Y Spill, D Balaramane, C Toussaint, M Weber, AF Bardet
Nucleic acids research 48 (W1), W208-W217, 2020
E2F6 initiates stable epigenetic silencing of germline genes during embryonic development
T Dahlet, M Truss, U Frede, H Al Adhami, AF Bardet, M Dumas, J Vallet, ...
Nature communications 12 (1), 3582, 2021
A comparative methylome analysis reveals conservation and divergence of DNA methylation patterns and functions in vertebrates
H Al Adhami, AF Bardet, M Dumas, E Cleroux, S Guibert, P Fauque, ...
BMC biology 20 (1), 70, 2022
Single amino acid repeats in signal peptides
PP Łabaj, GG Leparc, AF Bardet, G Kreil, DP Kreil
The FEBS Journal 277 (15), 3147-3157, 2010
Pan-cancer predictions of transcription factors mediating aberrant DNA methylation
D Detilleux, YG Spill, D Balaramane, M Weber, AF Bardet
Epigenetics & chromatin 15 (1), 10, 2022
Loss of Apc rapidly impairs DNA methylation programs and cell fate decisions in Lgr5+ intestinal stem cells
M Bruschi, L Garnier, E Cleroux, A Giordano, M Dumas, AF Bardet, ...
Cancer Research 80 (11), 2101-2113, 2020
The BTB-domain transcription factor ZBTB2 recruits chromatin remodelers and a histone chaperone during the exit from pluripotency
D Olivieri, S Paramanathan, AF Bardet, D Hess, SA Smallwood, U Elling, ...
Journal of Biological Chemistry 297 (2), 2021
Systematic identification of factors involved in the silencing of germline genes in mouse embryonic stem cells
H Al Adhami, J Vallet, C Schaal, P Schumacher, AF Bardet, M Dumas, ...
Nucleic Acids Research 51 (7), 3130-3149, 2023
Practical Guide to ChIP-seq Data Analysis
B Mifsud, K Zarnack, AF Bardet
CRC Press, 2018
Conserved Cis-Acting Range Extender Element Mediates Extreme Long-Range Enhancer Activity in Mammals
G Bower, E Hollingsworth, S Jacinto, B Clock, K Cao, M Liu, A Dziulko, ...
bioRxiv, 2024.05. 26.595809, 2024
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