Edoardo Pasolli
Edoardo Pasolli
Department of Agricultural Sciences, University of Naples Federico II
Verified email at - Homepage
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MetaPhlAn2 for Enhanced Metagenomic Taxonomic Profiling
DT Truong, EA Franzosa, TL Tickle, M Scholz, G Weingart, E Pasolli, ...
Nature Methods 12 (10), 902-903, 2015
Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle
E Pasolli, F Asnicar, S Manara, M Zolfo, N Karcher, F Armanini, F Beghini, ...
Cell 176 (3), 2019
Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome
P Ferretti, E Pasolli*, A Tett*, F Asnicar*, V Gorfer, S Fedi, F Armanini, ...
Cell Host & Microbe 24 (1), 133-145. e5, 2018
Metagenomic Analysis of Colorectal Cancer Datasets Identifies Cross-Cohort Microbial Diagnostic Signatures and a Link with Choline Degradation
AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ...
Nature Medicine 25, 667-678, 2019
Microbial Strain-Level Population Structure and Genetic Diversity from Metagenomes
DT Truong, A Tett, E Pasolli, C Huttenhower, N Segata
Genome Research 27 (4), 626-638, 2017
Machine Learning Meta-Analysis of Large Metagenomic Datasets: Tools and Biological Insights
E Pasolli, DT Truong, F Malik, L Waldron, N Segata
PLoS Computational Biology 12 (7), e1004977, 2016
Precise Phylogenetic Analysis of Microbial Isolates and Genomes from Metagenomes using PhyloPhlAn 3.0
F Asnicar, AM Thomas, F Beghini, C Mengoni, S Manara, P Manghi, ...
Nature Communications 11 (1), 1-10, 2020
Strain-Level Microbial Epidemiology and Population Genomics from Shotgun Metagenomics
M Scholz*, DV Ward*, E Pasolli*, T Tolio, M Zolfo, F Asnicar, DT Truong, ...
Nature Methods 13 (5), 435-438, 2016
Mediterranean Diet Intervention in Overweight and Obese Subjects Lowers Plasma Cholesterol and Causes Changes in the Gut Microbiome and Metabolome Independently of Energy Intake
V Meslier, M Laiola, HM Roager, F De Filippis, H Roume, B Quinquis, ...
Gut, 2020
Strain-level Analysis of Mother-to-Child Bacterial Transmission During the First Few Months of Life
M Yassour, E Jason, LJ Hogstrom, TD Arthur, S Tripathi, H Siljander, ...
Cell Host & Microbe 24 (1), 146-154. e4, 2018
Accessible, Curated Metagenomic Data through ExperimentHub
E Pasolli*, L Schiffer*, P Manghi*, A Renson, V Obenchain, DT Truong, ...
Nature Methods 14 (11), 1023-1024, 2017
Prevotella Diversity, Niches and Interactions with the Human Host
A Tett, E Pasolli, G Masetti, D Ercolini, N Segata
Nature Reviews Microbiology, 1-15, 2021
The Prevotella Copri Complex Comprises Four Distinct Clades That Are Underrepresented in Westernised Populations
A Tett, KD Huang, F Asnicar, H Fehlner-Peach, E Pasolli, N Karcher, ...
Cell Host & Microbe 26 (5), 666-679.e7, 2019
Extending and Improving Metagenomic Taxonomic Profiling with Uncharacterized Species using MetaPhlAn 4
A Blanco-Míguez, F Beghini, F Cumbo, LJ McIver, KN Thompson, M Zolfo, ...
Nature Biotechnology, 1-12, 2023
Automatic Analysis of GPR Images: A Pattern-Recognition Approach
E Pasolli, F Melgani, M Donelli
IEEE Transactions on Geoscience and Remote Sensing 47 (7), 2206-2217, 2009
Maternal Inheritance of Bifidobacterial Communities and Bifidophages in Infants through Vertical Transmission
S Duranti, GA Lugli, L Mancabelli, F Armanini, F Turroni, K James, ...
Microbiome 5 (1), 66, 2017
Distinct Genetic and Functional Traits of Human Intestinal Prevotella Copri Strains are Associated with Different Habitual Diets
F De Filippis, E Pasolli, A Tett, S Tarallo, A Naccarati, M De Angelis, ...
Cell Host & Microbe 25 (3), 444-453. e3, 2019
Cross-Reactivity Between Tumor MHC Class I–Restricted Antigens and an Enterococcal Bacteriophage
A Fluckiger, R Daillère, M Sassi, BS Sixt, P Liu, F Loos, C Richard, ...
Science 369 (6506), 936-942, 2020
Gut Bacteria Composition Drives Primary Resistance to Cancer Immunotherapy in Renal Cell Carcinoma Patients
L Derosa, B Routy, M Fidelle, V Iebba, L Alla, E Pasolli, N Segata, ...
European Urology 78 (2), 195-206, 2020
Large-Scale Genome-Wide Analysis Links Lactic Acid Bacteria from Food with the Gut Microbiome
E Pasolli, F De Filippis, IE Mauriello, F Cumbo, AM Walsh, J Leech, ...
Nature Communications 11 (1), 1-12, 2020
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