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Peter Waddell
Peter Waddell
Unknown affiliation
Verified email at massey.ac.nz
Title
Cited by
Cited by
Year
Partitioning and combining data in phylogenetic analysis
JJ Bull, JP Huelsenbeck, CW Cunningham, DL Swofford, PJ Waddell
Systematic Biology 42 (3), 384-397, 1993
11431993
Bias in phylogenetic estimation and its relevance to the choice between parsimony and likelihood methods
DL Swofford, PJ Waddell, JP Huelsenbeck, PG Foster, PO Lewis, ...
Systematic biology 50 (4), 525-539, 2001
4802001
Potential mechanisms for cancer resistance in elephants and comparative cellular response to DNA damage in humans
LM Abegglen, AF Caulin, A Chan, K Lee, R Robinson, MS Campbell, ...
Jama 314 (17), 1850-1860, 2015
4762015
Molecular systematics
DL Swofford, GJ Olsen, PJ Waddell, DM Hillis, C Moritz, BK Mable
4741996
Towards resolving the interordinal relationships of placental mammals
PJ Waddell, N Okada, M Hasegawa
Systematic Biology 48 (1), 1-5, 1999
4201999
A phylogenetic foundation for comparative mammalian genomics
PJ Waddell, H Kishino, R Ota
Genome Informatics 12, 141-154, 2001
3322001
Plastid genome phylogeny and a model of amino acid substitution for proteins encoded by chloroplast DNA
J Adachi, PJ Waddell, W Martin, M Hasegawa
Journal of molecular evolution 50, 348-358, 2000
2742000
Conflict among individual mitochondrial proteins in resolving the phylogeny of eutherian orders
Y Cao, A Janke, PJ Waddell, M Westerman, O Takenaka, S Murata, ...
Journal of Molecular Evolution 47, 307-322, 1998
2701998
Evolution of chlorophyll and bacteriochlorophyll: the problem of invariant sites in sequence analysis.
PJ Lockhart, AW Larkum, M Steel, PJ Waddell, D Penny
Proceedings of the National Academy of Sciences 93 (5), 1930-1934, 1996
2571996
General time-reversible distances with unequal rates across sites: mixing Γ and inverse Gaussian distributions with invariant sites
PJ Waddell, MA Steel
Molecular phylogenetics and evolution 8 (3), 398-414, 1997
2541997
Molecular systematics of primary reptilian lineages and the tuatara mitochondrial genome
JS Rest, JC Ast, CC Austin, PJ Waddell, EA Tibbetts, JM Hay, DP Mindell
Molecular phylogenetics and evolution 29 (2), 289-297, 2003
2212003
Using novel phylogenetic methods to evaluate mammalian mtDNA, including amino acid-invariant sites-LogDet plus site stripping, to detect internal conflicts in the data, with …
PJ Waddell, Y Cao, J Hauf, M Hasegawa
Systematic Biology 48 (1), 31-53, 1999
1811999
Widespread introgression across a phylogeny of 155 Drosophila genomes
A Suvorov, BY Kim, J Wang, EE Armstrong, D Peede, ERR D’agostino, ...
Current Biology 32 (1), 111-123. e5, 2022
1642022
Correspondence analysis of genes and tissue types and finding genetic links from microarray data
H Kishino, PJ Waddell
Genome Informatics 11, 83-95, 2000
1612000
Evolutionary trees of apes and humans from DNA sequences
P Waddell
Handbook of human symbolic evolution, 53-73, 1996
1511996
Evaluating placental inter-ordinal phylogenies with novel sequences including RAG1, γ-fibrinogen, ND6, and mt-tRNA, plus MCMC-driven nucleotide, amino acid, and codon models
PJ Waddell, S Shelley
Molecular phylogenetics and evolution 28 (2), 197-224, 2003
1492003
Assessing the Cretaceous superordinal divergence times within birds and placental mammals by using whole mitochondrial protein sequences and an extended statistical framework
PJ Waddell, Y Cao, M Hasegawa, DP Mindell
Systematic Biology 48 (1), 119-137, 1999
1411999
The complete mitochondrial DNA sequence of the shark Mustelus manazo: evaluating rooting contradictions to living bony vertebrates.
Y Cao, PJ Waddell, N Okada, M Hasegawa
Molecular biology and evolution 15 (12), 1637-1646, 1998
1231998
Appropriate likelihood ratio tests and marginal distributions for evolutionary tree models with constraints on parameters
R Ota, PJ Waddell, M Hasegawa, H Shimodaira, H Kishino
Molecular biology and evolution 17 (5), 798-803, 2000
1182000
Improved analyses of human mtDNA sequences support a recent African origin for Homo sapiens.
D Penny, M Steel, PJ Waddell, MD Hendy
Molecular biology and evolution 12 (5), 863-882, 1995
1171995
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