| The intronic long noncoding RNA ANRASSF1 recruits PRC2 to the RASSF1A promoter, reducing the expression of RASSF1A and increasing cell proliferation FC Beckedorff, AC Ayupe, R Crocci-Souza, MS Amaral, HI Nakaya, ... PLoS Genet 9 (8), e1003705, 2013 | 152 | 2013 |
| Long non-coding RNAs and their implications in cancer epigenetics FC Beckedorff, MS Amaral, C Deocesano-Pereira, S Verjovski-Almeida Bioscience reports 33 (4), 2013 | 93 | 2013 |
| Schistosoma mansoni egg, adult male and female comparative gene expression analysis and identification of novel genes by RNA-Seq L Anderson, MS Amaral, F Beckedorff, LF Silva, B Dazzani, KC Oliveira, ... PLoS neglected tropical diseases 9 (12), e0004334, 2015 | 51 | 2015 |
| Global analysis of biogenesis, stability and sub-cellular localization of lncRNAs mapping to intragenic regions of the human genome AC Ayupe, AC Tahira, L Camargo, FC Beckedorff, S Verjovski-Almeida, ... RNA biology 12 (8), 877-892, 2015 | 48 | 2015 |
| Exploring the Schistosoma mansoni adult male transcriptome using RNA-seq GT Almeida, MS Amaral, FCF Beckedorff, JP Kitajima, R DeMarco, ... Experimental parasitology 132 (1), 22-31, 2012 | 47 | 2012 |
| Polycomb complexes associate with enhancers and promote oncogenic transcriptional programs in cancer through multiple mechanisms HL Chan, F Beckedorff, Y Zhang, J Garcia-Huidobro, H Jiang, A Colaprico, ... Nature communications 9 (1), 1-16, 2018 | 44 | 2018 |
| Splice variants of TLE family genes and up-regulation of a TLE3 isoform in prostate tumors HI Nakaya, FC Beckedorff, ML Baldini, AA Fachel, EM Reis, ... Biochemical and biophysical research communications 364 (4), 918-923, 2007 | 43 | 2007 |
| Integrator orchestrates RAS/ERK1/2 signaling transcriptional programs J Yue, F Lai, F Beckedorff, A Zhang, C Pastori, R Shiekhattar Genes & development 31 (17), 1809-1820, 2017 | 19 | 2017 |
| Chromatin landscape distinguishes the genomic loci of hundreds of androgen-receptor-associated lincRNAs from the loci of non-associated lincRNAs LF daSilva, FC Beckedorff, AC Ayupe, MS Amaral, V Mesel, A Videira, ... Frontiers in genetics 9, 132, 2018 | 6 | 2018 |
| The human integrator complex facilitates transcriptional elongation by endonucleolytic cleavage of nascent transcripts F Beckedorff, E Blumenthal, L Ferreira daSilva, Y Aoi, PR Cingaram, ... Cell reports 32 (3), 107917, 2020 | 5 | 2020 |
| Integrator restrains paraspeckles assembly by promoting isoform switching of the lncRNA NEAT1 J Barra, GS Gaidosh, E Blumenthal, F Beckedorff, MM Tayari, N Kirstein, ... Science advances 6 (27), eaaz9072, 2020 | 5 | 2020 |
| Targeted chemotherapy overcomes drug resistance in melanoma J Yue, R Vendramin, F Liu, O Lopez, MG Valencia, HG Dos Santos, ... Genes & development 34 (9-10), 637-649, 2020 | 5 | 2020 |
| High-quality draft genome sequence resources of eight Xylella fastidiosa strains isolated from citrus, coffee, plum and hibiscus in South America. PM Pierry, WO de Santana, JP Kitajima, J Martins-Junior, P Zaini, ... Phytopathology, 2020 | 2 | 2020 |
| TAF1 plays a critical role in AML1-ETO driven leukemogenesis Y Xu, N Man, D Karl, C Martinez, F Liu, J Sun, CJ Martinez, GM Martin, ... Nature communications 10 (1), 1-15, 2019 | 2 | 2019 |
| PVT1 signals an androgen-dependent transcriptional repression program in prostate cancer cells and a set of the repressed genes predicts high-risk tumors A Videira, FC Beckedorff, S Verjovski-Almeida Cell Communication and Signaling 19 (1), 1-16, 2021 | | 2021 |
| AICAR inhibits protein kinase D1 activity leading to epigenetic downregulation of immediate early genes via the NF-kB pathway in acute lymphoblastic leukemia A Shvab, G Sun, B Li, F Beckedorff, GJ Leclerc, R Shiekhattar, JC Barredo Cancer Research 79 (13 Supplement), 1289-1289, 2019 | | 2019 |
| Acadesine Elicits a Rapid Epigenetic Reprograming of Immediate Early Genes through the Protein Kinase D1 Pathway in Acute Lymphoblastic Leukemia Cells Undergoing Energy … GC Sun, AC Shvab, BC Li, FC Beckedorff, GJ Leclerc, R Shiekhattar, ... Blood 132 (Supplement 1), 1321-1321, 2018 | | 2018 |
| COMPARATIVE GENOMICS OF XYLELLA FASTIDIOSA SOUTH AMERICAN STRAINS AM da Silva, WO de Santana, PM Pierry, PIP da Silva, FCF Beckedorff, ... 2010 Pierce’s Disease Research Symposium, 2010 | | 2010 |
