Paul Stothard
Paul Stothard
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DrugBank: a comprehensive resource for in silico drug discovery and exploration
DS Wishart, C Knox, AC Guo, S Shrivastava, M Hassanali, P Stothard, ...
Nucleic acids research 34 (suppl_1), D668-D672, 2006
HMDB: the human metabolome database
DS Wishart, D Tzur, C Knox, R Eisner, AC Guo, N Young, D Cheng, ...
Nucleic acids research 35 (suppl_1), D521-D526, 2007
The sequence manipulation suite: JavaScript programs for analyzing and formatting protein and DNA sequences
P Stothard
Biotechniques 28 (6), 1102-1104, 2000
The genome sequence of taurine cattle: a window to ruminant biology and evolution
CG Elsik, RL Tellam, KC Worley
Science 324 (5926), 522-528, 2009
Circular genome visualization and exploration using CGView
P Stothard, DS Wishart
Bioinformatics 21 (4), 537-539, 2005
Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle
HD Daetwyler, A Capitan, H Pausch, P Stothard, R Van Binsbergen, ...
Nature genetics 46 (8), 858-865, 2014
The CGView Server: a comparative genomics tool for circular genomes
JR Grant, P Stothard
Nucleic acids research 36 (suppl_2), W181-W184, 2008
BASys: a web server for automated bacterial genome annotation
GH Van Domselaar, P Stothard, S Shrivastava, JA Cruz, AC Guo, X Dong, ...
Nucleic acids research 33 (suppl_2), W455-W459, 2005
The genome sequence of taurine cattle: a window to ruminant biology and evolution
TBG Sequencing, CG Elsik, RL Tellam, KC Worley, Analysis Consortium
Science (New York, NY) 324 (5926), 522, 2009
Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars
M Li, S Tian, L Jin, G Zhou, Y Li, Y Zhang, T Wang, CKL Yeung, L Chen, ...
Nature genetics 45 (12), 1431-1438, 2013
PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites
D Cheng, C Knox, N Young, P Stothard, S Damaraju, DS Wishart
Nucleic acids research 36 (suppl_2), W399-W405, 2008
The CyberCell Database (CCDB): a comprehensive, self‐updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli
S Sundararaj, A Guo, B Habibi‐Nazhad, M Rouani, P Stothard, M Ellison, ...
Nucleic acids research 32 (suppl_1), D293-D295, 2004
Whole genome linkage disequilibrium maps in cattle
SD McKay, RD Schnabel, BM Murdoch, LK Matukumalli, J Aerts, ...
BMC genetics 8 (1), 74, 2007
Comparing thousands of circular genomes using the CGView Comparison Tool
JR Grant, AS Arantes, P Stothard
BMC genomics 13 (1), 1-8, 2012
Interactive microbial genome visualization with GView
A Petkau, M Stuart-Edwards, P Stothard, G Van Domselaar
Bioinformatics 26 (24), 3125-3126, 2010
Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery
P Stothard, JW Choi, U Basu, JM Sumner-Thomson, Y Meng, X Liao, ...
BMC genomics 12 (1), 559, 2011
PlasMapper: a web server for drawing and auto-annotating plasmid maps
X Dong, P Stothard, IJ Forsythe, DS Wishart
Nucleic acids research 32 (suppl_2), W660-W664, 2004
The genome of Polaromonas sp. strain JS666: insights into the evolution of a hydrocarbon-and xenobiotic-degrading bacterium, and features of relevance to biotechnology
TE Mattes, AK Alexander, PM Richardson, AC Munk, CS Han, P Stothard, ...
Applied and environmental microbiology 74 (20), 6405-6416, 2008
Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals
AC Bouwman, HD Daetwyler, AJ Chamberlain, CH Ponce, M Sargolzaei, ...
Nature genetics 50 (3), 362-367, 2018
In-depth annotation of SNPs arising from resequencing projects using NGS-SNP
JR Grant, AS Arantes, X Liao, P Stothard
Bioinformatics 27 (16), 2300-2301, 2011
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