| Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes A Vlasova, S Capella-Gutiérrez, M Rendón-Anaya, M Hernández-Oñate, ... Genome biology 17 (1), 1-18, 2016 | 166 | 2016 |
| SwissRegulon: a database of genome-wide annotations of regulatory sites M Pachkov, I Erb, N Molina, E Van Nimwegen Nucleic acids research 35 (suppl_1), D127-D131, 2007 | 141 | 2007 |
| Understanding sequencing data as compositions: an outlook and review TP Quinn, I Erb, MF Richardson, TM Crowley Bioinformatics 34 (16), 2870-2878, 2018 | 137 | 2018 |
| The functional importance of telomere clustering: global changes in gene expression result from SIR factor dispersion A Taddei, G Van Houwe, S Nagai, I Erb, E van Nimwegen, SM Gasser Genome research 19 (4), 611-625, 2009 | 132 | 2009 |
| Multiple sequence alignment modeling: methods and applications M Chatzou, C Magis, JM Chang, C Kemena, G Bussotti, I Erb, ... Briefings in bioinformatics 17 (6), 1009-1023, 2016 | 130 | 2016 |
| Using the T-Coffee package to build multiple sequence alignments of protein, RNA, DNA sequences and 3D structures JF Taly, C Magis, G Bussotti, JM Chang, P Di Tommaso, I Erb, ... Nature Protocols 6 (11), 1669-1682, 2011 | 102 | 2011 |
| Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx F Abascal, A Corvelo, F Cruz, JL Villanueva-Cañas, A Vlasova, ... Genome biology 17 (1), 1-19, 2016 | 100 | 2016 |
| Alignathon: a competitive assessment of whole-genome alignment methods D Earl, N Nguyen, G Hickey, RS Harris, S Fitzgerald, K Beal, I Seledtsov, ... Genome research 24 (12), 2077-2089, 2014 | 98 | 2014 |
| MotEvo: integrated Bayesian probabilistic methods for inferring regulatory sites and motifs on multiple alignments of DNA sequences P Arnold, I Erb, M Pachkov, N Molina, E van Nimwegen Bioinformatics 28 (4), 487-494, 2012 | 85 | 2012 |
| A field guide for the compositional analysis of any-omics data TP Quinn, I Erb, G Gloor, C Notredame, MF Richardson, TM Crowley GigaScience 8 (9), giz107, 2019 | 79 | 2019 |
| Third report on chicken genes and chromosomes 2015 M Schmid, J Smith, DW Burt, BL Aken, PB Antin, AL Archibald, C Ashwell, ... Cytogenetic and genome research 145 (2), 78-179, 2015 | 76 | 2015 |
| How should we measure proportionality on relative gene expression data? I Erb, C Notredame Theory in Biosciences 135 (1), 21-36, 2016 | 63 | 2016 |
| T-Coffee: tree-based consistency objective function for alignment evaluation C Magis, JF Taly, G Bussotti, JM Chang, P Di Tommaso, I Erb, ... Multiple Sequence Alignment Methods, 117-129, 2014 | 59 | 2014 |
| Genome-wide expression profiling, in vivo DNA binding analysis, and probabilistic motif prediction reveal novel Abf1 target genes during fermentation, respiration, and … U Schlecht, I Erb, P Demougin, N Robine, V Borde, E Nimwegen, ... Molecular biology of the cell 19 (5), 2193-2207, 2008 | 41 | 2008 |
| Transcription factor binding site positioning in yeast: proximal promoter motifs characterize TATA-less promoters I Erb, E Van Nimwegen PLoS One 6 (9), e24279, 2011 | 36 | 2011 |
| Principal component analysis of the effects of environmental enrichment and (-)-epigallocatechin-3-gallate on age-associated learning deficits in a mouse model of Down syndrome S Catuara-Solarz, J Espinosa-Carrasco, I Erb, K Langohr, C Notredame, ... Frontiers in behavioral neuroscience 9, 330, 2015 | 33 | 2015 |
| BlastR—fast and accurate database searches for non-coding RNAs G Bussotti, E Raineri, I Erb, M Zytnicki, A Wilm, E Beaudoing, P Bucher, ... Nucleic acids research 39 (16), 6886-6895, 2011 | 32 | 2011 |
| Multi-information in the thermodynamic limit I Erb, N Ay Journal of Statistical Physics 115 (3), 949-976, 2004 | 30 | 2004 |
| Combined treatment With environmental enrichment And (-)-epigallocatechin-3-gallate ameliorates learning deficits And hippocampal alterations In A mouse model Of Down syndrome S Catuara-Solarz, J Espinosa-Carrasco, I Erb, K Langohr, JR Gonzalez, ... eneuro 3 (5), 2016 | 24 | 2016 |
| Use of ChIP-Seq data for the design of a multiple promoter-alignment method I Erb, JR Gonzalez-Vallinas, G Bussotti, E Blanco, E Eyras, C Notredame Nucleic acids research 40 (7), e52-e52, 2012 | 24 | 2012 |
Cedric NotredamePrincipal Investigator, Centre For Genomic Regulation CRG, BarcelonaVerified email at crg.eu
