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Andrea Maria Chiariello
Andrea Maria Chiariello
UniversitÓ degli Studi di Napoli Federico II
Verified email at na.infn.it
Title
Cited by
Cited by
Year
Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation
J Fraser, C Ferrai, AM Chiariello, M Schueler, T Rito, G Laudanno, ...
Molecular systems biology 11 (12), 852, 2015
3312015
Polymer physics of chromosome large-scale 3D organisation
AM Chiariello, C Annunziatella, S Bianco, A Esposito, M Nicodemi
Scientific reports 6 (1), 29775, 2016
1552016
Polymer physics predicts the effects of structural variants on chromatin architecture
S Bianco, DG Lupi߽ez, AM Chiariello, C Annunziatella, K Kraft, ...
Nature genetics 50 (5), 662-667, 2018
1442018
Single-allele chromatin interactions identify regulatory hubs in dynamic compartmentalized domains
AM Oudelaar, JOJ Davies, LLP Hanssen, JM Telenius, R Schwessinger, ...
Nature genetics 50 (12), 1744-1751, 2018
1412018
Dynamic 3D chromatin architecture contributes to enhancer specificity and limb morphogenesis
BK Kragesteen, M Spielmann, C Paliou, V Heinrich, R Sch÷pflin, ...
Nature genetics 50 (10), 1463-1473, 2018
1382018
Preformed chromatin topology assists transcriptional robustness of Shh during limb development
C Paliou, P Guckelberger, R Sch÷pflin, V Heinrich, A Esposito, ...
Proceedings of the National Academy of Sciences 116 (25), 12390-12399, 2019
1122019
Release of paused RNA polymerase II at specific loci favors DNA double-strand-break formation and promotes cancer translocations
GI Dellino, F Palluzzi, AM Chiariello, R Piccioni, S Bianco, L Furia, ...
Nature genetics 51 (6), 1011-1023, 2019
772019
Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells
M Barbieri, SQ Xie, E Torlai Triglia, AM Chiariello, S Bianco, I de Santiago, ...
Nature structural & molecular biology 24 (6), 515-524, 2017
752017
Cell-type specialization is encoded by specific chromatin topologies
W Winick-Ng, A Kukalev, I Harabula, L Zea-Redondo, D Szabˇ, M Meijer, ...
Nature 599 (7886), 684-691, 2021
672021
Polymer physics indicates chromatin folding variability across single-cells results from state degeneracy in phase separation
M Conte, L Fiorillo, S Bianco, AM Chiariello, A Esposito, M Nicodemi
Nature communications 11 (1), 3289, 2020
652020
CTCF mediates dosage-and sequence-context-dependent transcriptional insulation by forming local chromatin domains
H Huang, Q Zhu, A Jussila, Y Han, B Bintu, C Kern, M Conte, Y Zhang, ...
Nature genetics 53 (7), 1064-1074, 2021
542021
Predicting chromatin architecture from models of polymer physics
S Bianco, AM Chiariello, C Annunziatella, A Esposito, M Nicodemi
Chromosome Research 25, 25-34, 2017
432017
Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin
L Fiorillo, F Musella, M Conte, R Kempfer, AM Chiariello, S Bianco, ...
Nature Methods 18 (5), 482-490, 2021
322021
A dynamic folded hairpin conformation is associated with α-globin activation in erythroid cells
AM Chiariello, S Bianco, AM Oudelaar, A Esposito, C Annunziatella, ...
Cell Reports 30 (7), 2125-2135. e5, 2020
312020
Structure of the human chromosome interaction network
S Sarnataro, AM Chiariello, A Esposito, A Prisco, M Nicodemi
PLoS One 12 (11), e0188201, 2017
302017
Molecular dynamics simulations of the strings and binders switch model of chromatin
C Annunziatella, AM Chiariello, A Esposito, S Bianco, L Fiorillo, ...
Methods 142, 81-88, 2018
252018
Computational approaches from polymer physics to investigate chromatin folding
S Bianco, AM Chiariello, M Conte, A Esposito, L Fiorillo, F Musella, ...
Current Opinion in Cell Biology 64, 10-17, 2020
212020
Polymer models of the hierarchical folding of the Hox-B chromosomal locus
C Annunziatella, AM Chiariello, S Bianco, M Nicodemi
Physical Review E 94 (4), 042402, 2016
212016
Modeling single-molecule conformations of the HoxD region in mouse embryonic stem and cortical neuronal cells
S Bianco, C Annunziatella, G Andrey, AM Chiariello, A Esposito, L Fiorillo, ...
Cell reports 28 (6), 1574-1583. e4, 2019
182019
Complementary chromosome folding by transcription factors and cohesin
MCF Pereira, CA Brackley, D Michieletto, C Annunziatella, S Bianco, ...
BioRxiv, 305359, 2018
182018
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