| A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology MJ Herrgård, N Swainston, P Dobson, WB Dunn, KY Arga, M Arvas, ... Nature biotechnology 26 (10), 1155-1160, 2008 | 692 | 2008 |
| Global analysis of protein structural changes in complex proteomes Y Feng, G De Franceschi, A Kahraman, M Soste, A Melnik, PJ Boersema, ... Nature biotechnology 32 (10), 1036-1044, 2014 | 362 | 2014 |
| Modeling Lactococcus lactis using a genome-scale flux model A Oliveira, J Nielsen, J Förster BMC microbiology 5 (1), 39, 2005 | 337 | 2005 |
| Regulation of yeast central metabolism by enzyme phosphorylation AP Oliveira, C Ludwig, P Picotti, M Kogadeeva, R Aebersold, U Sauer Molecular Systems Biology 8 (1), 2012 | 197 | 2012 |
| Architecture of transcriptional regulatory circuits is knitted over the topology of bio-molecular interaction networks A Oliveira, K Patil, J Nielsen BMC systems biology 2 (1), 17, 2008 | 156 | 2008 |
| The importance of post‐translational modifications in regulating Saccharomyces cerevisiae metabolism AP Oliveira, U Sauer FEMS yeast research 12 (2), 104-117, 2012 | 139 | 2012 |
| Reconstruction of the yeast Snf1 kinase regulatory network reveals its role as a global energy regulator R Usaite, MC Jewett, AP Oliveira, JR Yates, L Olsson, J Nielsen Molecular systems biology 5 (1), 2009 | 132 | 2009 |
| A systems biology approach to study glucose repression in the yeast Saccharomyces cerevisiae SL Westergaard, AP Oliveira, C Bro, L Olsson, J Nielsen Biotechnology and bioengineering 96 (1), 134-145, 2007 | 112 | 2007 |
| Unraveling condition-dependent networks of transcription factors that control metabolic pathway activity in yeast SM Fendt, AP Oliveira, S Christen, P Picotti, RC Dechant, U Sauer Molecular Systems Biology 6 (1), 2010 | 89 | 2010 |
| Reconstruction and logical modeling of glucose repression signaling pathways in Saccharomyces cerevisiae T Christensen, A Oliveira, J Nielsen BMC systems biology 3 (1), 7, 2009 | 79 | 2009 |
| Metabolic network driven analysis of genome-wide transcription data from Aspergillus nidulans H David, G Hofmann, AP Oliveira, H Jarmer, J Nielsen Genome biology 7 (11), R108, 2006 | 77 | 2006 |
| Dynamic phosphoproteomics reveals TORC1-dependent regulation of yeast nucleotide and amino acid biosynthesis AP Oliveira, C Ludwig, M Zampieri, H Weisser, R Aebersold, U Sauer Science Signaling 8 (374), rs4, 2015 | 71 | 2015 |
| Model Microbial Communities for Ecosystems Biology S Blasche, Y Kim, AP Oliveira, KR Patil Current Opinion in Systems Biology, 2017 | 53 | 2017 |
| Inferring causal metabolic signals that regulate the dynamic TORC1‐dependent transcriptome AP Oliveira, S Dimopoulos, AG Busetto, S Christen, R Dechant, L Falter, ... Molecular systems biology 11 (4), 802, 2015 | 42 | 2015 |
| The role of high-throughput transcriptome analysis in metabolic engineering MC Jewett, AP Oliveira, KR Patil, J Nielsen Biotechnology and Bioprocess Engineering 10 (5), 385-399, 2005 | 26 | 2005 |
| Elucidation of Genetic Interactions in the Yeast GATA-Factor Network Using Bayesian Model Selection A Milias-Argeitis, AP Oliveira, L Gerosa, L Falter, U Sauer, J Lygeros PLOS Comput Biol 12 (3), e1004784, 2016 | 14 | 2016 |
| From Gene Expression to Metabolic Fluxes AP Oliveira, MC Jewett, J Nielsen Introduction to Systems Biology, 37-66, 2007 | 10 | 2007 |
| Towards Enhancing Metabolic Engineering Through Systems Biology: PhD Thesis AP Oliveira Department of Systems Biology, Technical University of Denmark, 2008 | | 2008 |
Uwe SauerVerified email at ethz.ch
