Filip Ginter
Title
Cited by
Cited by
Year
Universal dependencies v1: A multilingual treebank collection
J Nivre, MC De Marneffe, F Ginter, Y Goldberg, J Hajic, CD Manning, ...
Proceedings of the Tenth International Conference on Language Resources and …, 2016
8272016
BioInfer: a corpus for information extraction in the biomedical domain
S Pyysalo, F Ginter, J Heimonen, J Björne, J Boberg, J Järvinen, ...
BMC bioinformatics 8 (1), 50, 2007
4652007
Universal Stanford dependencies: A cross-linguistic typology.
MC De Marneffe, T Dozat, N Silveira, K Haverinen, F Ginter, J Nivre, ...
LREC 14, 4585-4592, 2014
4562014
Distributional semantics resources for biomedical text processing
S Moen, TSS Ananiadou
Proceedings of LBM, 39-44, 2013
3592013
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
A Airola, S Pyysalo, J Björne, T Pahikkala, F Ginter, T Salakoski
BMC bioinformatics 9 (S11), S2, 2008
3242008
CoNLL 2018 shared task: Multilingual parsing from raw text to universal dependencies
D Zeman, J Hajic, M Popel, M Potthast, M Straka, F Ginter, J Nivre, ...
Proceedings of the CoNLL 2018 Shared Task: Multilingual parsing from raw …, 2018
2782018
Comparative analysis of five protein-protein interaction corpora
S Pyysalo, A Airola, J Heimonen, J Björne, F Ginter, T Salakoski
BMC bioinformatics 9 (S3), S6, 2008
2522008
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 1-19, 2016
2482016
Extracting complex biological events with rich graph-based feature sets
J Björne, J Heimonen, F Ginter, A Airola, T Pahikkala, T Salakoski
Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task, 10-18, 2009
2382009
Universal Dependencies 1.2
J Nivre, Ž Agić, MJ Aranzabe, M Asahara, A Atutxa, M Ballesteros, J Bauer, ...
Universal Dependencies Consortium, 2015
1652015
Complex event extraction at PubMed scale
J Björne, F Ginter, S Pyysalo, J Tsujii, T Salakoski
Bioinformatics 26 (12), i382-i390, 2010
1352010
Large-scale event extraction from literature with multi-level gene normalization
S Van Landeghem, J Björne, CH Wei, K Hakala, S Pyysalo, S Ananiadou, ...
PloS one 8 (4), e55814, 2013
1122013
A graph kernel for protein-protein interaction extraction
A Airola, S Pyysalo, J Björne, T Pahikkala, F Ginter, T Salakoski
Proceedings of the workshop on current trends in biomedical natural language …, 2008
1112008
Joint morphological and syntactic analysis for richly inflected languages
B Bohnet, J Nivre, I Boguslavsky, R Farkas, F Ginter, J Hajič
Transactions of the Association for Computational Linguistics 1, 415-428, 2013
1072013
Building the essential resources for Finnish: the Turku Dependency Treebank
K Haverinen, J Nyblom, T Viljanen, V Laippala, S Kohonen, A Missilä, ...
Language Resources and Evaluation 48 (3), 493-531, 2014
902014
University of Turku in the BioNLP'11 shared task
J Björne, F Ginter, T Salakoski
BMC bioinformatics 13 (S11), S4, 2012
712012
New techniques for disambiguation in natural language and their application to biological text
F Ginter, J Boberg, J Järvinen, T Salakoski
Journal of Machine Learning Research 5 (Jun), 605-621, 2004
622004
Analysis of link grammar on biomedical dependency corpus targeted at protein-protein interactions
S Pyysalo, F Ginter, T Pahikkala, J Boberg, J Järvinen, T Salakoski, ...
Proceedings of the International Joint Workshop on Natural Language …, 2004
532004
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
522019
EXTRACTING CONTEXTUALIZED COMPLEX BIOLOGICAL EVENTS WITH RICH GRAPH‐BASED FEATURE SETS
J Björne, J Heimonen, F Ginter, A Airola, T Pahikkala, T Salakoski
Computational Intelligence 27 (4), 541-557, 2011
512011
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Articles 1–20