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Jonathon Romero
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Accelerating climate resilient plant breeding by applying next-generation artificial intelligence
AL Harfouche, DA Jacobson, D Kainer, JC Romero, AH Harfouche, ...
Trends in biotechnology 37 (11), 1217-1235, 2019
1232019
Potentially adaptive SARS-CoV-2 mutations discovered with novel spatiotemporal and explainable AI models
MR Garvin, E T Prates, M Pavicic, P Jones, BK Amos, A Geiger, MB Shah, ...
Genome biology 21 (1), 1-26, 2020
462020
Synthesis and characterization of Fe-Ti-Sb intermetallic compounds: Discovery of a new Slater-Pauling phase
N Naghibolashrafi, S Keshavarz, VI Hegde, A Gupta, WH Butler, ...
Physical Review B 93 (10), 104424, 2016
372016
Can exascale computing and explainable artificial intelligence applied to plant biology deliver on the United Nations sustainable development goals?
J Streich, J Romero, JGFM Gazolla, D Kainer, A Cliff, ET Prates, JB Brown, ...
Current opinion in biotechnology 61, 217-225, 2020
302020
Anisotropy in layered half-metallic Heusler alloy superlattices
JG Azadani, K Munira, J Romero, J Ma, C Sivakumar, AW Ghosh, ...
Journal of Applied Physics 119 (4), 043904, 2016
242016
A high-performance computing implementation of iterative random forest for the creation of predictive expression networks
A Cliff, J Romero, D Kainer, A Walker, A Furches, D Jacobson
Genes 10 (12), 996, 2019
232019
Achieving perpendicular anisotropy in half-metallic Heusler alloys for spin device applications
K Munira, J Romero, WH Butler
Journal of Applied Physics 115 (17), 17B731, 2014
192014
Neurotransmitter networks in mouse prefrontal cortex are reconfigured by isoflurane anesthesia
X Zhang, AG Baer, JM Price, PC Jones, BJ Garcia, J Romero, AM Cliff, ...
Journal of Neurophysiology 123 (6), 2285-2296, 2020
142020
Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
A Furches, D Kainer, D Weighill, A Large, P Jones, AM Walker, J Romero, ...
Frontiers in plant science 10, 1249, 2019
92019
Polypharmacy-associated risk of hospitalisation among people ageing with and without HIV: an observational study
AC Justice, KS Gordon, J Romero, EJ Edelman, BJ Garcia, P Jones, ...
The Lancet Healthy Longevity 2 (10), e639-e650, 2021
82021
Rapid expansion of SARS-CoV-2 variants of concern is a result of adaptive epistasis
MR Garvin, ET Prates, J Romero, A Cliff, JGFM Gazolla, M Pickholz, ...
BioRxiv, 2021
42021
Evaluating the performance of random forest and iterative random forest based methods when applied to gene expression data
AM Walker, A Cliff, J Romero, MB Shah, P Jones, JGFM Gazolla, ...
Computational and Structural Biotechnology Journal 20, 3372-3386, 2022
22022
NF-κB perturbation reveals unique immunomodulatory functions in Prx1+ fibroblasts that promote development of atopic dermatitis
KI Ko, JJ Merlet, BP DerGarabedian, H Zhen, Y Suzuki-Horiuchi, ...
Science translational medicine 14 (630), eabj0324, 2022
12022
The emergence of highly fit SARS-CoV-2 variants accelerated by recombination
MR Garvin, ET Prates, J Romero, A Cliff, JGFM Gazolla, M Pickholz, ...
bioRxiv, 2021
12021
Antiviral Strategies Against SARS-CoV-2: A Systems Biology Approach
E Teixeira Prates, M Garvin, PC Jones, J Miller, K Sullivan, A Cliff, ...
Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States), 2022
2022
Better Understanding Genomic Architecture with the use of Applied Statistics and Explainable Artificial Intelligence
JC Romero
2022
Quantum biological insights into CRISPR-Cas9 sgRNA efficiency from explainable-AI driven feature engineering
JM Noshay, T Walker, J Romero, E Prates, C Eckert, S Irle, D Kainer, ...
bioRxiv, 2022
2022
Antiviral Strategies Against SARS-CoV-2: A Systems Biology Approach
ET Prates, MR Garvin, P Jones, JI Miller, KA Sullivan, A Cliff, ...
SARS-CoV-2, 317-351, 2022
2022
Using Explainable-AI to Find Geospatial Environmental and Sociodemographic Predictors of Suicide Attempts
M Pavicic, AM Walker, KA Sullivan, J Lagergren, A Cliff, J Romero, ...
medRxiv, 2022
2022
Digging deeper into GWAS signal using GRIN implicates additional genes contributing to suicidal behavior
KA Sullivan, M Lane, M Cashman, JI Miller, M Pavicic, AM Walker, A Cliff, ...
medRxiv, 2022
2022
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