Follow
Sanja Vickovic
Sanja Vickovic
NYGC, Columbia University, Uppsala University
Verified email at nygenome.org
Title
Cited by
Cited by
Year
Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
PL Ståhl, F Salmén, S Vickovic, A Lundmark, JF Navarro, J Magnusson, ...
Science 353 (6294), 78-82, 2016
29802016
Intra-and inter-cellular rewiring of the human colon during ulcerative colitis
CS Smillie, M Biton, J Ordovas-Montanes, KM Sullivan, G Burgin, ...
Cell 178 (3), 714-730. e22, 2019
11412019
High-definition spatial transcriptomics for in situ tissue profiling
S Vickovic, G Eraslan, F Salmén, J Klughammer, L Stenbeck, D Schapiro, ...
Nature methods 16 (10), 987-990, 2019
10312019
Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram
T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ...
Nature methods 18 (11), 1352-1362, 2021
5692021
Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
E Berglund, J Maaskola, N Schultz, S Friedrich, M Marklund, ...
Nature communications 9 (1), 2419, 2018
5182018
Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis
S Maniatis, T Äijö, S Vickovic, C Braine, K Kang, A Mollbrink, ...
Science 364 (6435), 89-93, 2019
4202019
Barcoded solid-phase RNA capture for Spatial Transcriptomics profiling in mammalian tissue sections
F Salmén, PL Ståhl, A Mollbrink, JF Navarro, S Vickovic, J Frisen, ...
Nature protocols 13 (11), 2501-2534, 2018
1982018
Spatially resolved transcriptome profiling in model plant species
S Giacomello, F Salmén, BK Terebieniec, S Vickovic, JF Navarro, ...
Nature plants 3 (6), 1-11, 2017
1822017
SM-Omics is an automated platform for high-throughput spatial multi-omics
S Vickovic, B Lötstedt, J Klughammer, S Mages, Å Segerstolpe, ...
Nature communications 13 (1), 795, 2022
1252022
SenNet recommendations for detecting senescent cells in different tissues
V Suryadevara, AD Hudgins, A Rajesh, A Pappalardo, A Karpova, AK Dey, ...
Nature Reviews Molecular Cell Biology, 1-23, 2024
812024
Spatial detection of fetal marker genes expressed at low level in adult human heart tissue
M Asp, F Salmén, PL Ståhl, S Vickovic, U Felldin, M Löfling, ...
Scientific reports 7 (1), 12941, 2017
722017
Three-dimensional spatial transcriptomics uncovers cell type localizations in the human rheumatoid arthritis synovium
S Vickovic, D Schapiro, K Carlberg, B Lötstedt, L Larsson, F Hildebrandt, ...
Communications Biology 5 (1), 129, 2022
522022
Massive and parallel expression profiling using microarrayed single-cell sequencing
S Vickovic, PL Ståhl, F Salmén, S Giatrellis, JO Westholm, A Mollbrink, ...
Nature communications 7 (1), 13182, 2016
512016
Spatial host–microbiome sequencing reveals niches in the mouse gut
B Lötstedt, M Stražar, R Xavier, A Regev, S Vickovic
Nature Biotechnology 42 (9), 1394-1403, 2024
482024
In silico tissue generation and power analysis for spatial omics
EAG Baker, D Schapiro, B Dumitrascu, S Vickovic, A Regev
Nature Methods 20 (3), 424-431, 2023
37*2023
DNA methylation: the future of crime scene investigation?
B Gršković, D Zrnec, S Vicković, M Popović, G Mršić
Molecular biology reports 40, 4349-4360, 2013
352013
Single cell analysis of cancer cells using an improved RT-MLPA method has potential for cancer diagnosis and monitoring
L Kvastad, B Werne Solnestam, E Johansson, AO Nygren, N Laddach, ...
Scientific Reports 5 (1), 16519, 2015
242015
Multidimensional transcriptomics provides detailed information about immune cell distribution and identity in HER2+ breast tumors
F Salmén, S Vickovic, L Larsson, L Stenbeck, J Vallon-Christersson, ...
BioRxiv, 358937, 2018
232018
Magnetic bead assisted labeling of antibodies at nanogram scale
M Dezfouli, S Vickovic, MJ Iglesias, P Nilsson, JM Schwenk, A Ahmadian
Proteomics 14 (1), 14-18, 2014
202014
Splotch: robust estimation of aligned spatial temporal gene expression data
T Äijö, S Maniatis, S Vickovic, K Kang, M Cuevas, C Braine, H Phatnani, ...
bioRxiv, 757096, 2019
142019
The system can't perform the operation now. Try again later.
Articles 1–20