Thomas Stoeger
Thomas Stoeger
Northwestern University, Data Science Scholar
Verified email at
Cited by
Cited by
Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi
JL Mummery-Widmer, M Yamazaki, T Stoeger, M Novatchkova, ...
Nature 458 (7241), 987-992, 2009
Control of transcript variability in single mammalian cells
N Battich, T Stoeger, L Pelkmans
Cell 163 (7), 1596-1610, 2015
Image-based transcriptomics in thousands of single human cells at single-molecule resolution
N Battich, T Stoeger, L Pelkmans
Nature methods 10 (11), 1127-1133, 2013
Large-scale investigation of the reasons why potentially important genes are ignored
T Stoeger, M Gerlach, RI Morimoto, LA Nunes Amaral
PLoS biology 16 (9), e2006643, 2018
Passive noise filtering by cellular compartmentalization
T Stoeger, N Battich, L Pelkmans
Cell 164 (6), 1151-1161, 2016
Cell-intrinsic adaptation of lipid composition to local crowding drives social behaviour
M Frechin, T Stoeger, S Daetwyler, C Gehin, N Battich, EM Damm, ...
Nature 523 (7558), 88-91, 2015
The lung microenvironment shapes a dysfunctional response of alveolar macrophages in aging
AC McQuattie-Pimentel, Z Ren, N Joshi, S Watanabe, T Stoeger, M Chi, ...
The Journal of clinical investigation 131 (4), 2021
Dachsous-dependent asymmetric localization of spiny-legs determines planar cell polarity orientation in Drosophila
T Ayukawa, M Akiyama, JL Mummery-Widmer, T Stoeger, J Sasaki, ...
Cell reports 8 (2), 610-621, 2014
Computer vision for image-based transcriptomics
T Stoeger, N Battich, MD Herrmann, Y Yakimovich, L Pelkmans
Methods 85, 44-53, 2015
Predicting functional gene interactions with the hierarchical interaction score
B Snijder, P Liberali, M Frechin, T Stoeger, L Pelkmans
Nature methods 10 (11), 1089-1092, 2013
Aging is associated with a systemic length-associated transcriptome imbalance
T Stoeger, RA Grant, AC McQuattie-Pimentel, K Anekalla, SS Liu, ...
Nature Aging, 2022
COVID-19 research risks ignoring important host genes due to pre-established research patterns
T Stoeger, LA Nunes Amaral
Elife 9, e61981, 2020
Post-transcriptional control of executioner caspases by RNA-binding proteins
D Subasic, T Stoeger, S Eisenring, AM Matia-González, J Imig, X Zheng, ...
Genes & development 30 (19), 2213-2225, 2016
The aging microenvironment shapes alveolar macrophage identity in aging
AC McQuattie-Pimentel, Z Ren, N Joshi, S Watanabe, T Stoeger, M Chi, ...
biorxiv, 717033, 2019
Identification of human gene research articles with wrongly identified nucleotide sequences
Y Park, RA West, P Pathmendra, B Favier, T Stoeger, A Capes-Davis, ...
Life Science Alliance 5 (4), 2022
Protection of the human gene research literature from contract cheating organizations known as research paper mills
JA Byrne, Y Park, RAK Richardson, P Pathmendra, M Sun, T Stoeger
Nucleic Acids Research 50 (21), 12058-12070, 2022
A comprehensive enumeration of the human proteostasis network. 1. Components of translation, protein folding, and organelle-specific systems
Proteostasis Consortium, S Elsasser, D Finley, E Mockler, L Lima, ...
BioRxiv, 2022.08. 30.505920, 2022
Machine learning links unresolving secondary pneumonia to mortality in patients with severe pneumonia, including COVID-19
CA Gao, NS Markov, T Stoeger, A Pawlowski, M Kang, P Nannapaneni, ...
The Journal of Clinical Investigation 133 (12), 2023
Addressing barriers in FAIR data practices for biomedical data
LD Hughes, G Tsueng, J DiGiovanna, TD Horvath, LV Rasmussen, ...
Scientific Data 10 (1), 98, 2023
Mathematical models to study the biology of pathogens and the infectious diseases they cause
JB Xavier, JM Monk, S Poudel, CJ Norsigian, AV Sastry, C Liao, J Bento, ...
Iscience, 2022
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