M Salathe, L Bengtsson, TJ Bodnar, DD Brewer, JS Brownstein, C Buckee, ...
PLoS Comput Biol 8 (7), e1002616, 2012
|HIV Infection Linked to Injection Use of Oxymorphone in Indiana, 2014-2015|
New England Journal of Medicine 375 (3), 229-239, 2016
|Notes from the field: HIV diagnoses among persons who inject drugs—Northeastern Massachusetts, 2015–2018|
K Cranston, C Alpren, B John, E Dawson, K Roosevelt, A Burrage, ...
Morbidity and Mortality Weekly Report 68 (10), 253, 2019
|Complex social contagion makes networks more vulnerable to disease outbreaks|
E Campbell, M Salathé
Scientific reports 3, 1905, 2013
|Detailed transmission network analysis of a large opiate-driven outbreak of HIV infection in the United States|
EM Campbell, H Jia, A Shankar, D Hanson, W Luo, S Masciotra, ...
The Journal of infectious diseases 216 (9), 1053-1062, 2017
|Identifying clusters of recent and rapid HIV transmission through analysis of molecular surveillance data|
AM Oster, AM France, N Panneer, MCB Ocfemia, E Campbell, ...
Journal of acquired immune deficiency syndromes (1999) 79 (5), 543, 2018
|Opioid use fueling HIV transmission in an urban setting: an outbreak of HIV infection among people who inject drugs—Massachusetts, 2015–2018|
C Alpren, EL Dawson, B John, K Cranston, N Panneer, HD Fukuda, ...
American Journal of Public Health 110 (1), 37-44, 2020
|Increasing HIV-1 subtype diversity in seven states, United States, 2006–2013|
AM Oster, WM Switzer, AL Hernandez, N Saduvala, JO Wertheim, ...
Annals of Epidemiology 27 (4), 244-251. e1, 2017
|A population model evaluating the consequences of the evolution of double-resistance and tradeoffs on the benefits of two-drug antibiotic treatments|
EM Campbell, L Chao
PloS one 9 (1), e86971, 2014
|Natural selection favoring more transmissible HIV detected in United States molecular transmission network|
JO Wertheim, AM Oster, WM Switzer, C Zhang, N Panneer, E Campbell, ...
Nature communications 10 (1), 1-10, 2019
|CliqueSNV: Scalable Reconstruction of Intra-Host Viral Populations from NGS Reads|
S Knyazev, V Tsyvina, A Melnyk, A Artyomenko, T Malygina, YB Porozov, ...
bioRxiv, 264242, 2018
|Bayesian inference reveals ancient origin of simian foamy virus in orangutans|
MJC Reid, WM Switzer, MA Schillaci, AR Klegarth, E Campbell, ...
Infection, Genetics and Evolution 51, 54-66, 2017
|Correlates of drug resistance mutations in ART-naive individuals with HIV infection|
SE Porter, E Campbell, E Westheimer, CL Gay, SE Cohen, A Shankar, ...
Conference on Retroviruses and Opportunistic Infections (CROI), 2017
|Human Immunodeficiency Virus (HIV) outbreak investigation among persons who inject drugs in Massachusetts enhanced by HIV sequence data|
M Tumpney, B John, N Panneer, RP McClung, EM Campbell, K Roosevelt, ...
The Journal of Infectious Diseases 222 (Supplement_5), S259-S267, 2020
|Notes from the Field: Outbreak of Human Immunodeficiency Virus Infection Among Persons Who Inject Drugs—Cabell County, West Virginia, 2018–2019|
A Atkins, RP McClung, M Kilkenny, K Bernstein, K Willenburg, A Edwards, ...
Morbidity and Mortality Weekly Report 69 (16), 499, 2020
|Phylodynamic Analysis Complements Partner Services by Identifying Acute and Unreported HIV Transmission|
EM Campbell, A Patala, A Shankar, JF Li, JA Johnson, E Westheimer, ...
Viruses 12 (2), 145, 2020
|MicrobeTrace: Retooling Molecular Epidemiology for Rapid Public Health Response|
EM Campbell, AA Boyles, A Shankar, J Kim, S Knyazev, WM Switzer
|CliqueSNV: An Efficient Noise Reduction Technique for Accurate Assembly of Viral Variants from NGS Data|
S Knyazev, V Tsyvina, A Shankar, A Melnyk, A Artyomenko, T Malygina, ...
bioRxiv, 264242, 2020
|A Multiplex HIV Incidence Assay for Inferring Recent HIV-1 Transmission and Time of Infection|
KA Curtis, EM Campbell, DL Hanson, DL Rudolph, J Duwve, SJ Blosser, ...
JAIDS Journal of Acquired Immune Deficiency Syndromes 80 (4), 454-460, 2019
|Characterization of New HIV Infections among Adults≥ 45 Years—New York City, North Carolina, San Francisco, 2011–2013|
M Evans, A Patala, E Campbell, E Westheimer, CL Gay, SE Cohen, ...
Open Forum Infectious Diseases 4 (Suppl 1), S15, 2017