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Mark J Dunning
Mark J Dunning
Verified email at sheffield.ac.uk - Homepage
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Year
The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups
C Curtis, SP Shah, SF Chin, G Turashvili, OM Rueda, MJ Dunning, ...
Nature 486 (7403), 346-352, 2012
49082012
Analysis of circulating tumor DNA to monitor metastatic breast cancer
SJ Dawson, DWY Tsui, M Murtaza, H Biggs, OM Rueda, SF Chin, ...
New England Journal of Medicine 368 (13), 1199-1209, 2013
21052013
Relative impact of nucleotide and copy number variation on gene expression phenotypes
BE Stranger, MS Forrest, M Dunning, CE Ingle, C Beazley, N Thorne, ...
Science 315 (5813), 848-853, 2007
19392007
Differential oestrogen receptor binding is associated with clinical outcome in breast cancer
CS Ross-Innes, R Stark, AE Teschendorff, KA Holmes, HR Ali, ...
Nature 481 (7381), 389-393, 2012
14922012
Population genomics of human gene expression
BE Stranger, AC Nica, MS Forrest, A Dimas, CP Bird, C Beazley, CE Ingle, ...
Nature genetics 39 (10), 1217-1224, 2007
13132007
MicroRNA expression profiling of human breast cancer identifies new markers of tumor subtype
C Blenkiron, LD Goldstein, NP Thorne, I Spiteri, SF Chin, MJ Dunning, ...
Genome biology 8 (10), 1-16, 2007
11372007
beadarray: R classes and methods for Illumina bead-based data
MJ Dunning, ML Smith, ME Ritchie, S Tavaré
Bioinformatics 23 (16), 2183-2184, 2007
5462007
Quantitative image analysis of cellular heterogeneity in breast tumors complements genomic profiling
Y Yuan, H Failmezger, OM Rueda, HR Ali, S Gräf, SF Chin, RF Schwarz, ...
Science translational medicine 4 (157), 157ra143-157ra143, 2012
3892012
Ordering of mutations in preinvasive disease stages of esophageal carcinogenesis
JMJ Weaver, CS Ross-Innes, N Shannon, AG Lynch, T Forshew, ...
Nature genetics 46 (8), 837-843, 2014
3202014
Tumour genomic and microenvironmental heterogeneity for integrated prediction of 5-year biochemical recurrence of prostate cancer: a retrospective cohort study
E Lalonde, AS Ishkanian, J Sykes, M Fraser, H Ross-Adams, N Erho, ...
The lancet oncology 15 (13), 1521-1532, 2014
3092014
A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data
NL Barbosa-Morais, MJ Dunning, SA Samarajiwa, JFJ Darot, ME Ritchie, ...
Nucleic acids research 38 (3), e17-e17, 2010
2752010
Langerød A
C Curtis, SP Shah, SF Chin, G Turashvili, OM Rueda, MJ Dunning, ...
Green A, Provenzano E, Wishart G, Pinder S, Watson P, Markowetz F, Murphy L …, 2012
2082012
Integration of copy number and transcriptomics provides risk stratification in prostate cancer: a discovery and validation cohort study
H Ross-Adams, AD Lamb, MJ Dunning, S Halim, J Lindberg, CM Massie, ...
EBioMedicine 2 (9), 1133-1144, 2015
2072015
Genome-driven integrated classification of breast cancer validated in over 7,500 samples
HR Ali, OM Rueda, SF Chin, C Curtis, MJ Dunning, SAJR Aparicio, ...
Genome biology 15 (8), 1-14, 2014
2002014
Statistical issues in the analysis of Illumina data
MJ Dunning, NL Barbosa-Morais, AG Lynch, S Tavaré, ME Ritchie
BMC bioinformatics 9 (1), 1-15, 2008
1302008
ZNF703 is a common Luminal B breast cancer oncogene that differentially regulates luminal and basal progenitors in human mammary epithelium
DG Holland, A Burleigh, A Git, MA Goldgraben, PA Perez‐Mancera, ...
EMBO molecular medicine 3 (3), 167-180, 2011
1242011
The pitfalls of platform comparison: DNA copy number array technologies assessed
C Curtis, AG Lynch, MJ Dunning, I Spiteri, JC Marioni, J Hadfield, SF Chin, ...
BMC genomics 10 (1), 1-23, 2009
1212009
Loss of centrioles causes chromosomal instability in vertebrate somatic cells
JH Sir, M Pütz, O Daly, CG Morrison, M Dunning, JV Kilmartin, F Gergely
Journal of Cell Biology 203 (5), 747-756, 2013
1202013
Gene regulatory mechanisms underpinning prostate cancer susceptibility
T Whitington, P Gao, W Song, H Ross-Adams, AD Lamb, Y Yang, I Svezia, ...
Nature genetics 48 (4), 387-397, 2016
992016
5-hydroxymethylcytosine marks promoters in colon that resist DNA hypermethylation in cancer
S Uribe-Lewis, R Stark, T Carroll, MJ Dunning, M Bachman, Y Ito, L Stojic, ...
Genome biology 16 (1), 1-15, 2015
782015
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