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Scott Le Grand
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Amber 2021
DA Case, HM Aktulga, K Belfon, I Ben-Shalom, SR Brozell, DS Cerutti, ...
University of California, San Francisco, 2021
51192021
Routine microsecond molecular dynamics simulations with AMBER on GPUs. 2. Explicit solvent particle mesh Ewald
R Salomon-Ferrer, AW Gotz, D Poole, S Le Grand, RC Walker
Journal of chemical theory and computation 9 (9), 3878-3888, 2013
29522013
Routine microsecond molecular dynamics simulations with AMBER on GPUs. 1. Generalized born
AW Götz, MJ Williamson, D Xu, D Poole, S Le Grand, RC Walker
Journal of chemical theory and computation 8 (5), 1542, 2012
14082012
SPFP: Speed without compromise—A mixed precision model for GPU accelerated molecular dynamics simulations
S Le Grand, AW Götz, RC Walker
Computer Physics Communications 184 (2), 374-380, 2013
10242013
Long-time-step molecular dynamics through hydrogen mass repartitioning
CW Hopkins, S Le Grand, RC Walker, AE Roitberg
Journal of chemical theory and computation 11 (4), 1864-1874, 2015
9602015
Routine microsecond molecular dynamics simulations with AMBER on GPUs. 1. Generalized born
AW Gotz, MJ Williamson, D Xu, D Poole, S Le Grand, RC Walker
Journal of chemical theory and computation 8 (5), 1542-1555, 2012
8272012
Parallel computing experiences with CUDA
M Garland, S Le Grand, J Nickolls, J Anderson, J Hardwick, S Morton, ...
IEEE micro 28 (4), 13-27, 2008
7732008
Accelerating molecular dynamic simulation on graphics processing units
MS Friedrichs, P Eastman, V Vaidyanathan, M Houston, S Legrand, ...
Journal of computational chemistry 30 (6), 864-872, 2009
6782009
GPU-accelerated molecular dynamics and free energy methods in Amber18: performance enhancements and new features
TS Lee, DS Cerutti, D Mermelstein, C Lin, S LeGrand, TJ Giese, ...
Journal of chemical information and modeling 58 (10), 2043-2050, 2018
3352018
Rapid approximation to molecular surface area via the use of Boolean logic and look‐up tables
SM Le Grand, KM Merz Jr
Journal of Computational Chemistry 14 (3), 349-352, 1993
1641993
A force field for monosaccharides and (1→ 4) linked polysaccharides
TM Glennon, YJ Zheng, SM Le Grand, BA Shutzberg, KM Merz Jr
Journal of computational chemistry 15 (9), 1019-1040, 1994
1501994
Broad-phase collision detection with CUDA
LEG Scott
GPU gems 3, 697-722, 2007
1442007
The application of the genetic algorithm to the minimization of potential energy functions
SM Le Grand, KM Merz
Journal of Global Optimization 3, 49-66, 1993
1091993
Local moves: An efficient algorithm for simulation of protein folding
A Elofsson, SM Le Grand, D Eisenberg
Proteins: Structure, Function, and Bioinformatics 23 (1), 73-82, 1995
851995
A study of combined structure/sequence profiles
A Elofsson, D Fischer, DW Rice, SM Le Grand, D Eisenberg
Folding and Design 1 (6), 451-461, 1996
731996
GPU-accelerated drug discovery with docking on the summit supercomputer: Porting, optimization, and application to COVID-19 research
S LeGrand, A Scheinberg, AF Tillack, M Thavappiragasam, JV Vermaas, ...
Proceedings of the 11th ACM international conference on bioinformatics …, 2020
722020
Conformational preferences for hydroxyl groups in substituted tetrahydropyrans
YJ Zheng, SM Le Grand, KM Merz Jr
Journal of computational chemistry 13 (6), 772-791, 1992
421992
High-throughput virtual laboratory for drug discovery using massive datasets
J Glaser, JV Vermaas, DM Rogers, J Larkin, S LeGrand, S Boehm, ...
The International Journal of High Performance Computing Applications 35 (5 …, 2021
412021
Controlling access to memory resources shared among parallel synchronizable threads
SM Le Grand
US Patent 8,108,659, 2012
382012
Performing an occurence count of radices
SM Le Grand
US Patent 8,094,157, 2012
322012
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