Gabriel E Leventhal

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Sebastian BonhoefferTheoretical Biology, ETH ZurichVerified email at env.ethz.ch
Tanja StadlerETH ZurichVerified email at env.ethz.ch
Roger D. KouyosUniversity of Zurich; University Hospital ZurichVerified email at uzh.ch
Huldrych F. GünthardProfessor for Infectious Diseases, University Hospital ZurichVerified email at usz.ch
Christophe FraserOxford Big Data Institute, Nuffield Department of Medicine, University of OxfordVerified email at bdi.ox.ac.uk
Otto X. CorderoAssociate Professor, Massachusetts Institute of TechnologyVerified email at mit.edu
Alexei J. DrummondProfessor of Computational Biology, University of AucklandVerified email at cs.auckland.ac.nz
Timothy G VaughanDepartment of Biosystems Science and Engineering, ETH Zürich, SwitzerlandVerified email at bsse.ethz.ch
David A RasmussenNorth Carolina State UniversityVerified email at ncsu.edu
Denise KühnertMax Planck Institute for the Science of Human HistoryVerified email at shh.mpg.de
Samuel AlizonDirecteur de Recherche, CNRS, MIVEGEC (ETE), MontpellierVerified email at ird.fr
Katrina LythgoeUniversity of OxfordVerified email at bdi.ox.ac.uk
Déirdre HollingsworthBig Data Institute, University of OxfordVerified email at bdi.ox.ac.uk
Alison L HillAssistant Professor, Institute for Computational Medicine, Johns Hopkins UniversityVerified email at jhmi.edu
Martin NowakProfessor of Mathematics and Biology, Harvard UniversityVerified email at harvard.edu
Viktor von WylEpidemiology, Biostatistics & Prevention Institute, University of ZurichVerified email at uzh.ch
Alex MarzelMedical statistics / Clinical epidemiologyVerified email at medstats.ch
Alex GavryushkinAssociate Professor of Biological Data Science, University of CanterburyVerified email at canterbury.ac.nz
Leonora BittlestonBoise State UniversityVerified email at boisestate.edu
Matti GralkaMassachusetts Institute of TechnologyVerified email at mit.edu

Gabriel E Leventhal

Head of R&D / CSO, PharmaBiome AG, Switzerland

Verified email at pharmabiome.com - Homepage

Microbial Ecology Evolutionary Theory Community Evolution Computational Biology Phylogenetics


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Virulence and pathogenesis of HIV-1 infection: an evolutionary perspective C Fraser, K Lythgoe, GE Leventhal, G Shirreff, TD Hollingsworth, S Alizon, ... Science 343 (6177), 2014	215	2014
Evolution and emergence of infectious diseases in theoretical and real-world networks GE Leventhal, AL Hill, MA Nowak, S Bonhoeffer Nature Communications 6, 6101, 2015	120	2015
Exploring the Complexity of the HIV-1 Fitness Landscape RD Kouyos, GE Leventhal, T Hinkley, M Haddad, JM Whitcomb, ... PLoS Genetics 8 (3), e1002551, 2012	113	2012
Inferring Epidemic Contact Structure from Phylogenetic Trees GE Leventhal, R Kouyos, T Stadler, V von Wyl, S Yerly, J Böni, C Cellerai, ... PLoS Computational Biology 8 (3), e1002413, 2012	101	2012
Using an epidemiological model for phylogenetic inference reveals density dependence in HIV transmission GE Leventhal, HF Günthard, S Bonhoeffer, T Stadler Molecular Biology and Evolution 31 (1), 6-17, 2014	71	2014
Phylogenetic tools for generalized HIV-1 epidemics: findings from the PANGEA-HIV methods comparison O Ratmann, EB Hodcroft, M Pickles, A Cori, M Hall, S Lycett, C Colijn, ... Molecular biology and evolution 34 (1), 185-203, 2017	54	2017
Micro-scale ecology regulates particulate organic matter turnover in model marine microbial communities TN Enke, GE Leventhal, M Metzger, JT Saavedra, OX Cordero Nature Communications 9, 2743, 2018	51	2018
Strain-level diversity drives alternative community types in millimeter scale granular biofilms G Leventhal, C Boix, U Kuechler, TN Enke, E Sliwerska, C Holliger, ... Nature Microbiology 3 (11), 1295-1303, 2018	42	2018
How well can the exponential-growth coalescent approximate constant-rate birth–death population dynamics? T Stadler, TG Vaughan, A Gavryushkin, S Guindon, D Kühnert, ... Proceedings of the Royal Society B: Biological Sciences 282 (1806), 20150420, 2015	31	2015
Delayed virulence and limited costs promote fecundity compensation upon infection GE Leventhal, R Dünner, SM Barribeau American Naturalist 103 (4), 480-493, 2014	27	2014
Why microbes secrete molecules to modify their environment: the case of iron-chelating siderophores GE Leventhal, M Ackermann, KT Schiessl Journal of the Royal Society Interface 16 (150), 20180674, 2019	25	2019
Dissecting HIV virulence: heritability of setpoint viral load, CD4+ T-cell decline, and per-parasite pathogenicity F Bertels, A Marzel, G Leventhal, V Mitov, J Fellay, HF Günthard, J Böni, ... Molecular biology and evolution 35 (1), 27-37, 2018	25	2018
Connecting the dots: network data and models in HIV epidemiology W Delva, GE Leventhal, S Helleringer Aids 30 (13), 2009-2020, 2016	25	2016
Estimating epidemic incidence and prevalence from genomic data TG Vaughan, GE Leventhal, DA Rasmussen, AJ Drummond, D Welch, ... Molecular Biology and Evolution, msz106, 2019	23	2019
How good are statistical models at approximating complex fitness landscapes? L Du Plessis, GE Leventhal, S Bonhoeffer Molecular biology and evolution 33 (9), 2454-2468, 2016	23	2016
High Heritability Is Compatible with the Broad Distribution of Set Point Viral Load in HIV Carriers S Bonhoeffer, C Fraser, GE Leventhal PLoS Pathogens 11 (2), e1004634, 2015	19	2015
Context-dependent dynamics lead to the assembly of functionally distinct microbial communities LS Bittleston, M Gralka, GE Leventhal, I Mizrahi, OX Cordero Nature communications 11 (1), 1-10, 2020	15*	2020
Parent-offspring regression to estimate the heritability of an HIV-1 trait in a realistic setup N Bachmann, T Turk, C Kadelka, A Marzel, M Shilaih, J Böni, V Aubert, ... Retrovirology 14 (1), 1-10, 2017	13	2017
Potential pitfalls in estimating viral load heritability GE Leventhal, S Bonhoeffer Trends in microbiology 24 (9), 687-698, 2016	13	2016
Virus-induced target cell activation reconciles set-point viral load heritability and within-host evolution A Hool, GE Leventhal, S Bonhoeffer Epidemics 5 (4), 174-180, 2013	10	2013

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