| Structure, function and diversity of the healthy human microbiome C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ... nature 486 (7402), 207, 2012 | 10050* | 2012 |
| Microbial diversity in the deep sea and the underexplored “rare biosphere” ML Sogin, HG Morrison, JA Huber, DM Welch, SM Huse, PR Neal, ... Proceedings of the National Academy of Sciences 103 (32), 12115-12120, 2006 | 4337 | 2006 |
| The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing L Dethlefsen, S Huse, ML Sogin, DA Relman PLoS biology 6 (11), e280, 2008 | 2842 | 2008 |
| A framework for human microbiome research BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ... nature 486 (7402), 215, 2012 | 2366* | 2012 |
| Accuracy and quality of massively parallel DNA pyrosequencing SM Huse, JA Huber, HG Morrison, ML Sogin, DM Welch Genome biology 8 (7), R143, 2007 | 1511 | 2007 |
| Ironing out the wrinkles in the rare biosphere through improved OTU clustering SM Huse, DM Welch, HG Morrison, ML Sogin Environmental microbiology 12 (7), 1889-1898, 2010 | 1469 | 2010 |
| Defining the healthy" core microbiome" of oral microbial communities E Zaura, BJF Keijser, SM Huse, W Crielaard BMC microbiology 9 (1), 259, 2009 | 1419 | 2009 |
| Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing SM Huse, L Dethlefsen, JA Huber, DM Welch, DA Relman, ML Sogin PLoS genetics 4 (11), e1000255, 2008 | 1177 | 2008 |
| Defining seasonal marine microbial community dynamics JA Gilbert, JA Steele, JG Caporaso, L Steinbrück, J Reeder, B Temperton, ... The ISME journal 6 (2), 298, 2012 | 1049 | 2012 |
| Microbial population structures in the deep marine biosphere JA Huber, DBM Welch, HG Morrison, SM Huse, PR Neal, DA Butterfield, ... science 318 (5847), 97-100, 2007 | 1016 | 2007 |
| A method for studying protistan diversity using massively parallel sequencing of V9 hypervariable regions of small-subunit ribosomal RNA genes LA Amaral-Zettler, EA McCliment, HW Ducklow, SM Huse PloS one 4 (7), e6372, 2009 | 1010 | 2009 |
| Correction: a method for studying Protistan diversity using massively parallel sequencing of V9 hypervariable regions of small-subunit ribosomal RNA genes LA Amaral-Zettler, EA McCliment, HW Ducklow, SM Huse PLoS One 4 (12), 2009 | 1010* | 2009 |
| Genomic minimalism in the early diverging intestinal parasite Giardia lamblia HG Morrison, AG McArthur, FD Gillin, SB Aley, RD Adam, GJ Olsen, ... Science 317 (5846), 1921-1926, 2007 | 950 | 2007 |
| Pyrosequencing analysis of the oral microflora of healthy adults BJF Keijser, E Zaura, SM Huse, J Van Der Vossen, FHJ Schuren, ... Journal of dental research 87 (11), 1016-1020, 2008 | 869 | 2008 |
| The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome D McDonald, JC Clemente, J Kuczynski, JR Rideout, J Stombaugh, ... GigaScience 1 (1), 7, 2012 | 785 | 2012 |
| A core human microbiome as viewed through 16S rRNA sequence clusters SM Huse, Y Ye, Y Zhou, AA Fodor PloS one 7 (6), e34242, 2012 | 657 | 2012 |
| Reproducible community dynamics of the gastrointestinal microbiota following antibiotic perturbation DA Antonopoulos, SM Huse, HG Morrison, TM Schmidt, ML Sogin, ... Infection and immunity 77 (6), 2367-2375, 2009 | 654 | 2009 |
| Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems L Zinger, LA Amaral-Zettler, JA Fuhrman, MC Horner-Devine, SM Huse, ... PLoS One 6 (9), e24570, 2011 | 618 | 2011 |
| Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences JR Rideout, Y He, JA Navas-Molina, WA Walters, LK Ursell, SM Gibbons, ... PeerJ 2, e545, 2014 | 617 | 2014 |
| Variability and diversity of nasopharyngeal microbiota in children: a metagenomic analysis D Bogaert, B Keijser, S Huse, J Rossen, R Veenhoven, E Van Gils, ... PloS one 6 (2), e17035, 2011 | 515 | 2011 |
