Sebastien Gagneux
Sebastien Gagneux
Swiss Tropical and Public Health Institute
Verified email at - Homepage
Cited by
Cited by
Variable host–pathogen compatibility in Mycobacterium tuberculosis
S Gagneux, K DeRiemer, T Van, M Kato-Maeda, BC De Jong, ...
Proceedings of the National Academy of Sciences 103 (8), 2869-2873, 2006
Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans
I Comas, M Coscolla, T Luo, S Borrell, KE Holt, M Kato-Maeda, J Parkhill, ...
Nature genetics 45 (10), 1176-1182, 2013
Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development
S Gagneux, PM Small
The Lancet infectious diseases 7 (5), 328-337, 2007
Human T cell epitopes of Mycobacterium tuberculosis are evolutionarily hyperconserved
I Comas, J Chakravartti, PM Small, J Galagan, S Niemann, K Kremer, ...
Nature genetics 42 (6), 498-503, 2010
The competitive cost of antibiotic resistance in Mycobacterium tuberculosis
S Gagneux, CD Long, PM Small, T Van, GK Schoolnik, BJM Bohannan
Science 312 (5782), 1944-1946, 2006
High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography
R Hershberg, M Lipatov, PM Small, H Sheffer, S Niemann, S Homolka, ...
PLoS biology 6 (12), e311, 2008
The Influence of Host and Bacterial Genotype on the Development of Disseminated Disease with Mycobacterium tuberculosis
M Caws, G Thwaites, S Dunstan, TR Hawn, N Thi Ngoc Lan, NTT Thuong, ...
PLoS pathogens 4 (3), e1000034, 2008
Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes
I Comas, S Borrell, A Roetzer, G Rose, B Malla, M Kato-Maeda, J Galagan, ...
Nature genetics 44 (1), 106-110, 2012
Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis
KI Bos, KM Harkins, A Herbig, M Coscolla, N Weber, I Comas, SA Forrest, ...
Nature 514 (7523), 494-497, 2014
Genotyping of genetically monomorphic bacteria: DNA sequencing in Mycobacterium tuberculosis highlights the limitations of current methodologies
I Comas, S Homolka, S Niemann, S Gagneux
PloS one 4 (11), e7815, 2009
Evolutionary history and global spread of the Mycobacterium tuberculosis Beijing lineage
M Merker, C Blin, S Mona, N Duforet-Frebourg, S Lecher, E Willery, ...
Nature genetics 47 (3), 242-249, 2015
Host–pathogen coevolution in human tuberculosis
S Gagneux
Philosophical Transactions of the Royal Society B: Biological Sciences 367 …, 2012
Mycobacterium tuberculosis mutation rate estimates from different lineages predict substantial differences in the emergence of drug-resistant tuberculosis
CB Ford, RR Shah, MK Maeda, S Gagneux, MB Murray, T Cohen, ...
Nature genetics 45 (7), 784-790, 2013
Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis
MR Farhat, BJ Shapiro, KJ Kieser, R Sultana, KR Jacobson, TC Victor, ...
Nature genetics 45 (10), 1183-1189, 2013
Ecology and evolution of Mycobacterium tuberculosis
S Gagneux
Nature Reviews Microbiology 16 (4), 202-213, 2018
Consequences of genomic diversity in Mycobacterium tuberculosis
M Coscolla, S Gagneux
Seminars in immunology 26 (6), 431-444, 2014
Mycobacterium africanum—Review of an Important Cause of Human Tuberculosis in West Africa
BC De Jong, M Antonio, S Gagneux
PLoS neglected tropical diseases 4 (9), e744, 2010
Progression to Active Tuberculosis, but Not Transmission, Varies by Mycobacterium tuberculosis Lineage in The Gambia
BC de Jong, PC Hill, A Aiken, T Awine, A Martin, IM Adetifa, ...
The Journal of infectious diseases 198 (7), 1037-1043, 2008
Acquired resistance to bedaquiline and delamanid in therapy for tuberculosis
GV Bloemberg, PM Keller, D Stucki, A Trauner, S Borrell, T Latshang, ...
New England Journal of Medicine 373 (20), 1986-1988, 2015
Infectiousness, reproductive fitness and evolution of drug-resistant Mycobacterium tuberculosis [State of the art]
S Borrell, S Gagneux
The International Journal of Tuberculosis and Lung Disease 13 (12), 1456-1466, 2009
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