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Stefan de Kok
Stefan de Kok
Genomatica
Verified email at genomatica.com
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De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN. PK113-7D, a model for modern industrial biotechnology
JF Nijkamp, M van den Broek, E Datema, S de Kok, L Bosman, MA Luttik, ...
Microbial Cell Factories 11 (1), 36, 2012
2852012
Rapid and reliable DNA assembly via ligase cycling reaction
S de Kok, LH Stanton, T Slaby, M Durot, VF Holmes, KG Patel, D Platt, ...
ACS synthetic biology 3 (2), 97-106, 2014
2842014
Engineering topology and kinetics of sucrose metabolism in Saccharomyces cerevisiae for improved ethanol yield
TO Basso, S de Kok, M Dario, JCA do Espirito-Santo, G Müller, ...
Metabolic engineering 13 (6), 694-703, 2011
1142011
Energy coupling in Saccharomyces cerevisiae: selected opportunities for metabolic engineering
S de Kok, BU Kozak, JT Pronk, AJA van Maris
FEMS Yeast Research 12 (4), 387-397, 2012
1002012
Laboratory evolution of new lactate transporter genes in a jen1Δ mutant of Saccharomyces cerevisiae and their identification as ADY2 alleles by whole‐genome resequencing and …
S de Kok, JF Nijkamp, B Oud, FC Roque, D de Ridder, JM Daran, ...
FEMS yeast research 12 (3), 359-394, 2012
722012
Increasing free-energy (ATP) conservation in maltose-grown Saccharomyces cerevisiae by expression of a heterologous maltose phosphorylase
S de Kok, D Yilmaz, E Suir, JT Pronk, JM Daran, AJA van Maris
Metabolic Engineering 13 (5), 518-526, 2011
652011
Impact of dissolved hydrogen partial pressure on mixed culture fermentations
S de Kok, J Meijer, MCM van Loosdrecht, R Kleerebezem
Applied Microbiology and Biotechnology 97 (6), 2617-2625, 2013
642013
You get what you screen for: on the value of fermentation characterization in high-throughput strain improvements in industrial settings
M Wehrs, A de Beaumont-Felt, A Goranov, P Harrigan, S de Kok, S Lieder, ...
Journal of Industrial Microbiology & Biotechnology: Official Journal of the …, 2020
162020
In vivo analysis of Saccharomyces cerevisiae plasma membrane ATPase Pma1p isoforms with increased in vitro H+/ATP stoichiometry
S de Kok, D Yilmaz, JM Daran, JT Pronk, AJA van Maris
Antonie van Leeuwenhoek 102 (2), 401-406, 2012
142012
Optimization of organisms for performance in larger scale conditions based on performance in smaller scale conditions
S De Kok, P Enyeart, R Hansen, T Hauck, Z Serber, A Taylor, T Treynor, ...
US Patent App. 16/762,022, 2020
12020
Metabolic engineering of free-energy (ATP) conserving reactions in Saccharomyces cerevisiae
S de Kok
PhD-thesis Delft University of Technology, 2012
12012
Compositions and methods for synthesis of terpenoids
S De Kok, W Lau, F Mcsorley, H Meyer, Z Serber, G Wawrzyn
US Patent App. 17/622,619, 2022
2022
Downscaling parameters to design experiments and plate models for micro-organisms at small scale to improve prediction of performance at larger scale
S De Kok, P Enyeart, R Hansen, T Hauck, C Humphries, S Lieder, ...
US Patent App. 17/608,871, 2022
2022
Engineered biosynthetic pathways for production of l-homocysteine by fermentation
MS Siddiqui, AG Shearer, F Lu, S De Kok, CA Tracewell, SM Edgar, J Yip
US Patent App. 17/442,090, 2022
2022
Engineered biosynthetic pathways for production of tyramine by fermentation
MS Siddiqui, S De Kok, AG Shearer, F Lu, CA Tracewell, SM Edgar
US Patent 11,028,416, 2021
2021
Systematic and comprehensive genome engineering to improve microbe performance for use in large-scale fermentation
S de Kok
Recent Advances In Fermentation Technology (RAFT 13), 2019
2019
Metabolic Engineering for Fuels and Chemicals II-Sponsored by ZYMERGEN
Z Shao, R Jain
2017 SIMB Annual Meeting and Exhibition, 2017
2017
Systematic and comprehensive genome engineering for improved microbial performance
S de Kok
2017 SIMB Annual Meeting and Exhibition, 2017
2017
Laboratory evolution of new lactate transporter genes in a jen1¿ mutant of Saccharomyces cerevisiae and their identification as ADY2 alleles by whole-genome resequencing and …
MA van den Broek, S de Kok, JF Nijkamp, B Oud, F Roque, D de Ridder, ...
5th Conference on Physiology of Yeast and Filamentous Fungi, 2013
2013
Increasing free-energy (ATP) conservation in maltose-grown Saccharomyces cerevisiae by expression of a heterologous maltose phosphorylase
R Mans, WL Marques, S de Kok, D Yilmaz, E Suir, JT Pronk, JM Daran, ...
5th Conference on Physiology of Yeast and Filamentous Fungi, 2013
2013
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