Helena L. Crowell
Helena L. Crowell
PhD candidate, University of Zurich, Switzerland
Verified email at uzh.ch - Homepage
Title
Cited by
Cited by
Year
CyTOF workflow: differential discovery in high-throughput high-dimensional cytometry datasets
M Nowicka, C Krieg, LM Weber, FJ Hartmann, S Guglietta, B Becher, ...
F1000Research 6, 2017
1822017
Compensation of signal spillover in suspension and imaging mass cytometry
S Chevrier, HL Crowell, VRT Zanotelli, S Engler, MD Robinson, ...
Cell Systems 6 (5), 612-620. e5, 2018
1362018
On the discovery of population-specific state transitions from multi-sample multi-condition single-cell RNA sequencing data
HL Crowell, C Soneson, PL Germain, D Calini, L Collin, C Raposo, ...
BioRxiv, 713412, 2019
282019
Feedback mechanisms control coexistence in a stem cell model of acute myeloid leukaemia
HL Crowell, AL MacLean, MPH Stumpf
Journal of theoretical biology 401, 43-53, 2016
182016
CATALYST: Cytometry dATa anALYSis Tools
HL Crowell, V Zanotelli, S Chevrier, MD Robinson, B Bodenmiller
Bioconductor version: Release (3.11) 10, B9, 2020
162020
Muscat detects subpopulation-specific state transitions from multi-sample multi-condition single-cell transcriptomics data
HL Crowell, C Soneson, PL Germain, D Calini, L Collin, C Raposo, ...
Nature communications 11 (1), 1-12, 2020
92020
An R-based reproducible and user-friendly preprocessing pipeline for CyTOF data
HL Crowell, S Chevrier, A Jacobs, S Sivapatham, B Bodenmiller, ...
F1000Research 9 (1263), 1263, 2020
82020
CATALYST: Cytometry dATa anALYSis Tools. R package version 1.12. 2
H Crowell, CS ZV, M Robinson
62020
SpatialExperiment: infrastructure for spatially resolved transcriptomics data in R using Bioconductor
D Righelli, LM Weber, HL Crowell, B Pardo, L Collado-Torres, ...
bioRxiv, 2021
42021
CellMixS: quantifying and visualizing batch effects in single-cell RNA-seq data
A Lütge, J Zyprych-Walczak, UB Kunzmann, HL Crowell, D Calini, ...
Life science alliance 4 (6), 2021
22021
Hand2 delineates mesothelium progenitors and is reactivated in mesothelioma
KD Prummel, HL Crowell, S Nieuwenhuize, EC Brombacher, S Daetwyler, ...
bioRxiv, 2020.11. 11.355693, 2021
12021
Channel crosstalk correction in suspension and imaging mass cytometry
S Chevrier, H Crowell, V Zanotelli, S Engler, MD Robinson, B Bodenmiller
bioRxiv, 185744, 2017
12017
Predicting neurological recovery after traumatic spinal cord injury by time-resolved analysis of monocyte subsets
RA Heller, J Seelig, HL Crowell, M Pilz, P Haubruck, Q Sun, L Schomburg, ...
Brain, 2021
2021
Selenium-binding protein 1 (SELENBP1) as biomarker for adverse clinical outcome after traumatic spinal cord injury
J Seelig, RA Heller, P Haubruck, Q Sun, JG Klingenberg, J Hackler, ...
Frontiers in neuroscience 15, 2021
2021
distinct: a novel approach to differential distribution analyses
S Tiberi, HL Crowell, LM Weber, P Samartsidis, MD Robinson
bioRxiv, 2020.11. 24.394213, 2021
2021
distinct: a method for differential analyses via hierarchical permutation tests, with applications to single-cell data
S Tiberi, HL Crowell, P Samartsidis, LM Weber, MD Robinson
F1000Research 9, 2020
2020
An R-based reproducible and user-friendly preprocessin g pipeline for CyTOF data [version 1; peer review: awaiting peer
HL Crowell, S Chevrier, A Jacobs, MD Robinson
2020
Supplementary material distinct: a novel approach to differential distribution analyses
S Tiberi, HL Crowell, LM Weber, P Samartsidis, MD Robinson
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