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Alastair M. Kilpatrick
Alastair M. Kilpatrick
Bioinformatician, Centre for Regenerative Medicine
Adresse e-mail validée de ed.ac.uk - Page d'accueil
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Failures of nerve regeneration caused by aging or chronic denervation are rescued by restoring Schwann cell c-Jun
LJ Wagstaff, JA Gomez-Sanchez, SV Fazal, GW Otto, AM Kilpatrick, ...
Elife 10, e62232, 2021
762021
TWEAK/Fn14 signalling promotes cholangiocarcinoma niche formation and progression
BJ Dwyer, EJ Jarman, J Gogoi-Tiwari, S Ferreira-Gonzalez, L Boulter, ...
Journal of hepatology 74 (4), 860-872, 2021
582021
Applying, evaluating and refining bioinformatics core competencies (an update from the curriculum task force of ISCB’s education committee)
L Welch, C Brooksbank, R Schwartz, SL Morgan, B Gaeta, AM Kilpatrick, ...
PLoS computational biology 12 (5), e1004943, 2016
312016
Human biliary epithelial cells from discarded donor livers rescue bile duct structure and function in a mouse model of biliary disease
JM Hallett, S Ferreira-Gonzalez, TY Man, AM Kilpatrick, H Esser, ...
Cell Stem Cell 29 (3), 355-371. e10, 2022
242022
Senolytic treatment preserves biliary regenerative capacity lost through cellular senescence during cold storage
S Ferreira-Gonzalez, TY Man, H Esser, R Aird, AM Kilpatrick, ...
Science Translational Medicine 14 (674), eabj4375, 2022
132022
PDGFRβ+ cells play a dual role as hematopoietic precursors and niche cells during mouse ontogeny
D Sá da Bandeira, AM Kilpatrick, M Marques, M Gomez-Salazar, ...
Cell Reports 40 (3), 111114, 2022
102022
Brain matters: unveiling the distinct contributions of region, age, and sex to glia diversity and CNS function
LA Seeker, N Bestard-Cuche, S Jäkel, NL Kazakou, SMK Bøstrand, ...
Acta Neuropathologica Communications 11 (1), 84, 2023
92023
Stochastic EM-based TFBS motif discovery with MITSU
AM Kilpatrick, B Ward, S Aitken
Bioinformatics 30 (12), i310-i318, 2014
92014
Marked regional glial heterogeneity in the human white matter of the central nervous system
LA Seeker, N Bestard-Cuche, S Jäkel, NL Kazakou, SMK Bøstrand, ...
Biorxiv, 2022.03. 22.485367, 2022
52022
Ten simple rules for designing learning experiences that involve enhancing computational biology Wikipedia articles
AM Kilpatrick, A Anjum, L Welch
PLOS Computational Biology 16 (5), e1007868, 2020
52020
The 5th ISCB Wikipedia Competition: Coming to a Classroom Near You?
AM Kilpatrick
PLOS Computational Biology 12 (12), e1005235, 2016
52016
Dizzy-Beats: a Bayesian evidence analysis tool for systems biology
S Aitken, AM Kilpatrick, OE Akman
Bioinformatics 31 (11), 1863-1865, 2015
42015
p57Kip2 regulates embryonic blood stem cells by controlling sympathoadrenal progenitor expansion
C Kapeni, L Nitsche, AM Kilpatrick, NK Wilson, K Xia, ...
Blood, The Journal of the American Society of Hematology 140 (5), 464-477, 2022
32022
MCOIN: a novel heuristic for determining transcription factor binding site motif width
AM Kilpatrick, B Ward, S Aitken
Algorithms for Molecular Biology 8, 1-12, 2013
32013
Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia
AM Kilpatrick, F Rahman, A Anjum, S Shome, KMS Andalib, S Banik, ...
Bioinformatics 38 (Supplement_1), i19-i27, 2022
22022
The International Society for Computational Biology and WikiProject Computational Biology: celebrating 10 years of collaboration towards open access
K O’Neill, V Rai, AM Kilpatrick
Bioinformatics 33 (15), 2429-2430, 2017
22017
Electroconvulsive stimuli reverse neuro-inflammation and behavioral deficits in a mouse model of depression.
AG Rooney, AM Kilpatrick, C ffrench-Constant
bioRxiv, 2023.05. 13.540577, 2023
12023
Runx1+ vascular smooth muscle cells are essential for hematopoietic stem and progenitor cell development in vivo
ZN Gonzalez Galofre, AM Kilpatrick, M Marques, D Sá da Bandeira, ...
Nature Communications 15 (1), 1653, 2024
2024
Transcriptomic analysis of high-grade fibrosis in alcohol-induced liver disease
GKR Dhondalay, AM Kilpatrick, L Martinez-Gili, N Vergis, LD Tyson, ...
Hepatology 78 (S1), S1664-S1665, 2023
2023
Transcriptomic analysis identifies senescence-related mechanisms associated with disease severity in alcohol-associated hepatitis
D Rodrigo-Torres, AM Kilpatrick, SR Atkinson, S Ferreira-Gonzalez, ...
Hepatology 78 (S1), S1664, 2023
2023
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