Nicholas Luscombe
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An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57-74, 2012
A census of human transcription factors: function, expression and evolution
JM Vaquerizas, SK Kummerfeld, SA Teichmann, NM Luscombe
Nature Reviews Genetics 10 (4), 252-263, 2009
A user's guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS biol 9 (4), e1001046, 2011
Genomic analysis of regulatory network dynamics reveals large topological changes
NM Luscombe, MM Babu, H Yu, M Snyder, SA Teichmann, M Gerstein
Nature 431 (7006), 308-312, 2004
Amino acid–base interactions: a three-dimensional analysis of protein–DNA interactions at an atomic level
NM Luscombe, RA Laskowski, JM Thornton
Nucleic acids research 29 (13), 2860-2874, 2001
DNA-binding specificities of human transcription factors
A Jolma, J Yan, T Whitington, J Toivonen, KR Nitta, P Rastas, ...
Cell 152 (1-2), 327-339, 2013
Structure and evolution of transcriptional regulatory networks
MM Babu, NM Luscombe, L Aravind, M Gerstein, SA Teichmann
Current opinion in structural biology 14 (3), 283-291, 2004
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution
J König, K Zarnack, G Rot, T Curk, M Kayikci, B Zupan, DJ Turner, ...
Nature structural & molecular biology 17 (7), 909, 2010
An overview of the structures of protein-DNA complexes
NM Luscombe, SE Austin, HM Berman, JM Thornton
Genome biology 1 (1), reviews001. 1, 2000
What is bioinformatics? A proposed definition and overview of the field
NM Luscombe, D Greenbaum, M Gerstein
Methods of information in medicine 40 (4), 346-358, 2001
Annotation transfer between genomes: protein–protein interologs and protein–DNA regulogs
H Yu, NM Luscombe, HX Lu, X Zhu, Y Xia, JDJ Han, N Bertin, S Chung, ...
Genome research 14 (6), 1107-1118, 2004
Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C
B Mifsud, F Tavares-Cadete, AN Young, R Sugar, S Schoenfelder, ...
Nature genetics 47 (6), 598, 2015
Protein clefts in molecular recognition and function.
RA Laskowski, NM Luscombe, MB Swindells, JM Thornton
Protein science: a publication of the Protein Society 5 (12), 2438, 1996
Protein–RNA interactions: a structural analysis
S Jones, DTA Daley, NM Luscombe, HM Berman, JM Thornton
Nucleic acids research 29 (4), 943-954, 2001
Distribution of NF-κB-binding sites across human chromosome 22
R Martone, G Euskirchen, P Bertone, S Hartman, TE Royce, ...
Proceedings of the National Academy of Sciences 100 (21), 12247-12252, 2003
Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities
A Jolma, T Kivioja, J Toivonen, L Cheng, G Wei, M Enge, M Taipale, ...
Genome research 20 (6), 861-873, 2010
Protein–RNA interactions: new genomic technologies and perspectives
J König, K Zarnack, NM Luscombe, J Ule
Nature Reviews Genetics 13 (2), 77-83, 2012
The transcriptional activity of human Chromosome 22
JL Rinn, G Euskirchen, P Bertone, R Martone, NM Luscombe, S Hartman, ...
Genes & development 17 (4), 529-540, 2003
Complex transcriptional circuitry at the G1/S transition in Saccharomyces cerevisiae
CE Horak, NM Luscombe, J Qian, P Bertone, S Piccirrillo, M Gerstein, ...
Genes & development 16 (23), 3017-3033, 2002
Protein family and fold occurrence in genomes: power-law behaviour and evolutionary model
J Qian, NM Luscombe, M Gerstein
Journal of molecular biology 313 (4), 673-681, 2001
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