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Yu Lin
Yu Lin
School of Computing, Australian National University
Verified email at anu.edu.au - Homepage
Title
Cited by
Cited by
Year
Assembly of long, error-prone reads using repeat graphs
M Kolmogorov, J Yuan, Y Lin, PA Pevzner
Nature biotechnology 37 (5), 540-546, 2019
31942019
Assembly of long error-prone reads using de Bruijn graphs
Y Lin, J Yuan, M Kolmogorov, MW Shen, M Chaisson, PA Pevzner
Proceedings of the National Academy of Sciences 113 (52), E8396-E8405, 2016
3022016
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics
Y Yang, X Liu, C Shen, Y Lin, P Yang, L Qiao
Nature communications 11 (1), 146, 2020
1962020
Targeted mRNA demethylation using an engineered dCas13b-ALKBH5 fusion protein
J Li, Z Chen, F Chen, G Xie, Y Ling, Y Peng, Y Lin, N Luo, CM Chiang, ...
Nucleic acids research 48 (10), 5684-5694, 2020
1792020
MLGO: phylogeny reconstruction and ancestral inference from gene-order data
F Hu, Y Lin, J Tang
BMC bioinformatics 15, 1-6, 2014
1112014
A metric for phylogenetic trees based on matching
Y Lin, V Rajan, BME Moret
IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (4 …, 2011
1042011
An exact algorithm to compute the double-cut-and-join distance for genomes with duplicate genes
M Shao, Y Lin, BME Moret
Journal of Computational Biology 22 (5), 425-435, 2015
872015
Modeling dynamic heterogeneous network for link prediction using hierarchical attention with temporal rnn
H Xue, L Yang, W Jiang, Y Wei, Y Hu, Y Lin
Machine Learning and Knowledge Discovery in Databases: European Conference …, 2021
762021
GraphBin: refined binning of metagenomic contigs using assembly graphs
V Mallawaarachchi, A Wickramarachchi, Y Lin
Bioinformatics 36 (11), 3307-3313, 2020
712020
Estimating true evolutionary distances under the DCJ model
Y Lin, BME Moret
Bioinformatics 24 (13), i114-i122, 2008
652008
Direct MALDI-TOF MS identification of bacterial mixtures
Y Yang, Y Lin, L Qiao
Analytical chemistry 90 (17), 10400-10408, 2018
642018
Maximum likelihood phylogenetic reconstruction from high-resolution whole-genome data and a tree of 68 eukaryotes
Y Lin, F Hu, J Tang, BME Moret
The Pacific Symposium on Biocomputing 2013, 285-296, 2013
622013
Morphological stasis masks ecologically divergent coral species on tropical reefs
P Bongaerts, IR Cooke, H Ying, D Wels, S den Haan, ...
Current Biology 31 (11), 2286-2298. e8, 2021
522021
Noncontact three-dimensional diffuse optical imaging of deep tissue blood flow distribution
G Yu, Y Lin, C Huang
US Patent 9,861,319, 2018
522018
Approximating the edit distance for genomes with duplicate genes under DCJ, insertion and deletion
M Shao, Y Lin
BMC bioinformatics 13 (Suppl 19), S13, 2012
482012
Sorting signed permutations by inversions in O (n log n) time
KM Swenson, V Rajan, Y Lin, BME Moret
Journal of Computational Biology 17 (3), 489-501, 2010
482010
Detection and analysis of ancient segmental duplications in mammalian genomes
L Pu, Y Lin, PA Pevzner
Genome research 28 (6), 901-909, 2018
412018
Deriving the probabilities of water loss and ammonia loss for amino acids from tandem mass spectra
S Sun, C Yu, Y Qiao, Y Lin, G Dong, C Liu, J Zhang, Z Zhang, J Cai, ...
Journal of proteome research 7 (01), 202-208, 2008
372008
RNA m6A methylation regulates dissemination of cancer cells by modulating expression and membrane localization of β-catenin
J Li, G Xie, Y Tian, W Li, Y Wu, F Chen, Y Lin, X Lin, SWN Au, J Cao, ...
Molecular Therapy 30 (4), 1578-1596, 2022
342022
Multiplex bipartite network embedding using dual hypergraph convolutional networks
H Xue, L Yang, V Rajan, W Jiang, Y Wei, Y Lin
Proceedings of the Web Conference 2021, 1649-1660, 2021
332021
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Articles 1–20