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Shayoni Ray
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GeneLab: Omics database for spaceflight experiments
S Ray, S Gebre, H Fogle, D Berrios, PB Tran, JM Galazka, SV Costes
Bioinformatics 35 (10), 1753-1759, 2019
792019
A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response
A Beheshti, S Ray, H Fogle, D Berrios, SV Costes
PLoS One 13 (7), e0199621, 2018
372018
LIM kinase regulation of cytoskeletal dynamics is required for salivary gland branching morphogenesis
S Ray, JA Fanti, DP Macedo, M Larsen
Molecular Biology of the Cell 25 (16), 2393-2407, 2014
282014
Comparing Photon and Charged Particle Therapy Using DNA Damage Biomarkers
S Ray, C Egle, PL Ivan, SS Brita, C Sylvain V.
International Journal of Proton Therapy 5 (1), 15-24, 2018
262018
Multiscale feature analysis of salivary gland branching morphogenesis
CC Bilgin, S Ray, B Baydil, WP Daley, M Larsen, B Yener
PLoS One 7 (3), e32906, 2012
242012
DNA binding ability and hydrogen peroxide induced nuclease activity of a novel Cu (II) complex with malonate as the primary ligand and protonated 2-amino-4-picoline as the …
B Saha, MM Islam, S Paul, S Samanta, S Ray, CR Santra, SR Choudhury, ...
The Journal of Physical Chemistry B 114 (17), 5851-5861, 2010
232010
Genetic modification and recombination of salivary gland organ cultures
SJ Sequeira, EM Gervais, S Ray, M Larsen
JoVE (Journal of Visualized Experiments), e50060, 2013
222013
NASA GeneLab RNA-seq consensus pipeline: standardized processing of short-read RNA-seq data
EG Overbey, AM Saravia-Butler, Z Zhang, KS Rathi, H Fogle, ...
Iscience 24 (4), 2021
212021
Cell-based multi-parametric model of cleft progression during submandibular salivary gland branching morphogenesis
S Ray, D Yuan, N Dhulekar, B Oztan, B Yener, M Larsen
PLoS Computational Biology 9 (11), e1003319, 2013
162013
Prediction of growth factor-dependent cleft formation during branching morphogenesis using a dynamic graph-based growth model
N Dhulekar, S Ray, D Yuan, A Baskaran, B Oztan, M Larsen, B Yener
IEEE/ACM Transactions on Computational Biology and Bioinformatics 13 (2 …, 2015
122015
Cell-graph modeling of salivary gland morphology
CC Bilgin, S Ray, WP Daley, B Baydil, SJ Sequeira, B Yener, M Larsen
2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …, 2010
122010
RNAseq analysis of rodent spaceflight experiments is confounded by sample collection techniques
SHL Polo, AM Saravia-Butler, V Boyko, MT Dinh, YC Chen, H Fogle, ...
Iscience 23 (12), 2020
82020
Mouse genome-wide association studies and systems genetics uncover the genetic architecture associated with hepatic pharmacokinetic and pharmacodynamic properties of a …
E Pirie, S Ray, C Pan, W Fu, AF Powers, D Polikoff, CM Miller, KM Kudrna, ...
PLoS genetics 14 (10), e1007732, 2018
62018
A novel dynamic graph-based computational model for predicting salivary gland branching morphogenesis
N Dhulekar, L Bange, A Baskaran, D Yuan, B Oztan, B Yener, S Ray, ...
2012 IEEE International Conference on Bioinformatics and Biomedicine, 1-8, 2012
52012
Hybrid mouse diversity panel identifies genetic architecture associated with the acute antisense oligonucleotide-mediated inflammatory response to a 2′-O-Methoxyethyl …
E Pirie, P Cauntay, W Fu, S Ray, C Pan, AJ Lusis, J Hsiao, SA Burel, ...
nucleic acid therapeutics 29 (5), 266-277, 2019
42019
Coalescence of DNA double strand breaks induced by galactic cosmic radiation is modulated by genetics in 15 inbred strains of mice
S Penninckx, S Ray, K Staatz, C Degorre, E Guiet, L Viger, AM Snijders, ...
2018
Computational Modeling-Driven Study of Signaling Pathway Affecting Cleft Formation During Submandibular Salivary Gland Development
S Ray
State University of New York at Albany, 2014
2014
The Viscoelastic Properties of Mouse Embryonic Salivary Glands
RA Koppes, AK Mason, SB Peters, S Ray, M Larsen, DT Corr
Summer Bioengineering Conference 55614, V01BT35A003, 2013
2013
Cellular Dynamics in Salivary Gland Branching Morphogenesis
M Larsen, S Ray, D Yuan, L Bange, N Dhulekar, A Bhaskaran, B Otzan, ...
The FASEB Journal 27, 14.2-14.2, 2013
2013
Multiscale Feature Analysis of Salivary Gland Branching Morphogenesis
M Larsen, WP Daley, S Ray, CC Bilgin, B Baydil, B Yener
2012
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Articles 1–20