Andreas Prlic
Andreas Prlic
UCSD / SDSC
Verified email at sdsc.edu - Homepage
Title
Cited by
Cited by
Year
Ensembl 2007
TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ...
Nucleic acids research 35 (suppl_1), D610-D617, 2007
15182007
Ensembl 2008
P Flicek, I Ahmed, MR Amode, D Barrell, K Beal, S Brent, ...
Nucleic acids research, gks1236, 2012
592*2012
The RCSB Protein Data Bank: redesigned web site and web services
PW Rose, B Beran, C Bi, WF Bluhm, D Dimitropoulos, DS Goodsell, ...
Nucleic acids research 39 (suppl_1), D392-D401, 2010
5342010
The RCSB protein data bank: integrative view of protein, gene and 3D structural information
PW Rose, A Prlić, A Altunkaya, C Bi, AR Bradley, CH Christie, ...
Nucleic acids research, gkw1000, 2016
4932016
Ensembl 2006
E Birney, D Andrews, P Bevan, M Caccamo, G Cameron, Y Chen, ...
D468 D470, 2004
4682004
The RCSB Protein Data Bank: new resources for research and education
PW Rose, C Bi, WF Bluhm, CH Christie, D Dimitropoulos, S Dutta, ...
Nucleic acids research 41 (D1), D475-D482, 2012
4162012
The RCSB Protein Data Bank: views of structural biology for basic and applied research and education
PW Rose, A Prlić, C Bi, WF Bluhm, CH Christie, S Dutta, RK Green, ...
Nucleic acids research 43 (D1), D345-D356, 2015
4142015
RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy
SK Burley, HM Berman, C Bhikadiya, C Bi, L Chen, L Di Costanzo, ...
Nucleic acids research 47 (D1), D464-D474, 2019
2892019
BioJava: an open-source framework for bioinformatics
RCG Holland, TA Down, M Pocock, A Prlić, D Huen, K James, S Foisy, ...
Bioinformatics 24 (18), 2096-2097, 2008
2762008
NGL viewer: web-based molecular graphics for large complexes
AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić, PW Rose
Bioinformatics 34 (21), 3755-3758, 2018
2112018
Recon3D enables a three-dimensional view of gene variation in human metabolism
E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ...
Nature biotechnology 36 (3), 272, 2018
1982018
BioJava: an open-source framework for bioinformatics in 2012
A Prlić, A Yates, SE Bliven, PW Rose, J Jacobsen, PV Troshin, ...
Bioinformatics 28 (20), 2693-2695, 2012
1872012
Pre-calculated protein structure alignments at the RCSB PDB website
A Prlić, S Bliven, PW Rose, WF Bluhm, C Bizon, A Godzik, PE Bourne
Bioinformatics 26 (23), 2983-2985, 2010
1822010
Structure-derived substitution matrices for alignment of distantly related sequences
A Prlić, FS Domingues, MJ Sippl
Protein Engineering 13 (8), 545-550, 2000
1202000
Ten simple rules for the open development of scientific software
A Prlić, JB Procter
PLoS Comput Biol 8 (12), e1002802, 2012
1192012
Integrating biological data–the distributed annotation system
AM Jenkinson, M Albrecht, E Birney, H Blankenburg, T Down, RD Finn, ...
BMC bioinformatics 9 (8), 1-7, 2008
1102008
SISYPHUS—structural alignments for proteins with non-trivial relationships
A Andreeva, A Prlić, TJP Hubbard, AG Murzin
Nucleic acids research 35 (suppl_1), D253-D259, 2007
852007
Integrating sequence and structural biology with DAS
A Prlić, TA Down, E Kulesha, RD Finn, A Kähäri, TJP Hubbard
BMC bioinformatics 8 (1), 333, 2007
832007
Web-based molecular graphics for large complexes
AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić, PW Rose
Proceedings of the 21st international conference on Web3D technology, 185-186, 2016
812016
Trendspotting in the Protein Data Bank.
H Berman, CN Buvaneswari, DC Luigi, D Shuchismita, G Sutapa, ...
FEBS letters, 2013
772013
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