Kazuhiro R. Nitta
Kazuhiro R. Nitta
Juntendo Univ
Adresse e-mail validée de ki.se
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DNA-binding specificities of human transcription factors
A Jolma, J Yan, T Whitington, J Toivonen, KR Nitta, P Rastas, ...
Cell 152 (1-2), 327-339, 2013
8832013
Impact of cytosine methylation on DNA binding specificities of human transcription factors
Y Yin, E Morgunova, A Jolma, E Kaasinen, B Sahu, S Khund-Sayeed, ...
Science 356 (6337), 2017
4102017
DNA-dependent formation of transcription factor pairs alters their binding specificity
A Jolma, Y Yin, KR Nitta, K Dave, A Popov, M Taipale, M Enge, T Kivioja, ...
Nature 527 (7578), 384-388, 2015
3122015
Conservation of transcription factor binding specificities across 600 million years of bilateria evolution
KR Nitta, A Jolma, Y Yin, E Morgunova, T Kivioja, J Akhtar, K Hens, ...
elife 4, e04837, 2015
1222015
Myt1l safeguards neuronal identity by actively repressing many non-neuronal fates
M Mall, MS Kareta, S Chanda, H Ahlenius, N Perotti, B Zhou, SD Grieder, ...
Nature 544 (7649), 245-249, 2017
862017
The interaction landscape between transcription factors and the nucleosome
F Zhu, L Farnung, E Kaasinen, B Sahu, Y Yin, B Wei, SO Dodonova, ...
Nature 562 (7725), 76-81, 2018
792018
XSIP1 is essential for early neural gene expression and neural differentiation by suppression of BMP signaling
KR Nitta, K Tanegashima, S Takahashi, M Asashima
Developmental biology 275 (1), 258-267, 2004
572004
ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets
M Brozovic, C Dantec, J Dardaillon, D Dauga, E Faure, M Gineste, ...
Nucleic acids research 46 (D1), D718-D725, 2018
472018
Expression of Sox1 during Xenopus early embryogenesis
KR Nitta, S Takahashi, Y Haramoto, M Fukuda, Y Onuma, M Asashima
Biochemical and biophysical research communications 351 (1), 287-293, 2006
422006
The N-terminus zinc finger domain of Xenopus SIP1 is important for neural induction, but not for suppression of Xbra expression
KR Nitta, S Takahashi, Y Haramoto, M Fukuda, K Tanegashima, Y Onuma, ...
International Journal of Developmental Biology 51 (4), 321-325, 2004
232004
Structure and function of AvtR, a novel transcriptional regulator from a hyperthermophilic archaeal lipothrixvirus
N Peixeiro, J Keller, B Collinet, N Leulliot, V Campanacci, D Cortez, ...
Journal of Virology 87 (1), 124-136, 2013
222013
HemR is an OmpR/PhoB‐like response regulator from Leptospira, which simultaneously effects transcriptional activation and repression of key haem metabolism …
NR Morero, H Botti, KR Nitta, F Carrión, G Obal, M Picardeau, ...
Molecular microbiology 94 (2), 340-352, 2014
112014
Functional annotation of human long noncoding RNAs via molecular phenotyping
JA Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ...
Genome Research 30 (7), 1060-1072, 2020
72020
ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates
J Dardaillon, D Dauga, P Simion, E Faure, TA Onuma, MB DeBiasse, ...
Nucleic acids research 48 (D1), D668-D675, 2020
62020
High-Throughput Protein Production Combined with High- Throughput SELEX Identifies an Extensive Atlas of Ciona robusta Transcription Factor DNA-Binding …
KR Nitta, R Vincentelli, E Jacox, A Cimino, Y Ohtsuka, D Sobral, Y Satou, ...
High-Throughput Protein Production and Purification, 487-517, 2019
52019
Spacer sequences separating transcription factor binding motifs set enhancer quality and strength
M Guéroult-Bellone, KR Nitta, W Kari, E Jacox, RB Dauzat, R Vincentelli, ...
bioRxiv, 098830, 2017
12017
Corrigendum: Functional annotation of human long noncoding RNAs via molecular phenotyping
JA Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ...
Genome Research 30 (9), 1377-1-1377-1, 2020
2020
Fatal Perinatal Mitochondrial Cardiac Failure Caused by Recurrent De Novo Duplications in the ATAD3 Locus
AE Frazier, AG Compton, Y Kishita, DH Hock, AME Welch, ...
Med, 2020
2020
A homozygous variant in NDUFA8 is associated with developmental delay, microcephaly, and epilepsy due to mitochondrial complex I deficiency
Y Yatsuka, Y Kishita, LE Formosa, M Shimura, F Nozaki, T Fujii, KR Nitta, ...
Clinical Genetics, 2020
2020
Functional analysis of sequence and structural features of SINEUP effector domain, a new class of positive post-transcriptional gene regulator non-coding RNAs
H Sharma, H Takahashi, K Nitta, S Zucchelli, S Gustincich, P Carninci
HUMAN GENOMICS 12, 2018
2018
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