Markus Covert
Title
Cited by
Cited by
Year
A whole-cell computational model predicts phenotype from genotype
JR Karr, JC Sanghvi, DN Macklin, MV Gutschow, JM Jacobs, B Bolival Jr, ...
Cell 150 (2), 389-401, 2012
11542012
Integrating high-throughput and computational data elucidates bacterial networks
MW Covert, EM Knight, JL Reed, MJ Herrgard, BO Palsson
Nature 429 (6987), 92-96, 2004
9192004
Single-cell NF-κB dynamics reveal digital activation and analogue information processing
S Tay, JJ Hughey, TK Lee, T Lipniacki, SR Quake, MW Covert
Nature 466 (7303), 267-271, 2010
7182010
Achieving stability of lipopolysaccharide-induced NF-κB activation
MW Covert, TH Leung, JE Gaston, D Baltimore
Science 309 (5742), 1854-1857, 2005
6742005
Regulation of gene expression in flux balance models of metabolism
MW Covert, CH Schilling, B Palsson
Journal of theoretical biology 213 (1), 73-88, 2001
5212001
Metabolic modelling of microbes: the flux‐balance approach
JS Edwards, M Covert, B Palsson
Environmental microbiology 4 (3), 133-140, 2002
4282002
Genome-scale metabolic model of Helicobacter pylori 26695
CH Schilling, MW Covert, I Famili, GM Church, JS Edwards, BO Palsson
Journal of bacteriology 184 (16), 4582-4593, 2002
4232002
Transcriptional regulation in constraints-based metabolic models of Escherichia coli
MW Covert, BØ Palsson
Journal of Biological Chemistry 277 (31), 28058-28064, 2002
4072002
Metabolic modeling of microbial strains in silico
MW Covert, CH Schilling, I Famili, JS Edwards, II Goryanin, E Selkov, ...
Trends in biochemical sciences 26 (3), 179-186, 2001
3772001
Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli
MW Covert, N Xiao, TJ Chen, JR Karr
Bioinformatics 24 (18), 2044-2050, 2008
3232008
Neuron‐to‐neuron transmission of α‐synuclein fibrils through axonal transport
EC Freundt, N Maynard, EK Clancy, S Roy, L Bousset, Y Sourigues, ...
Annals of neurology 72 (4), 517-524, 2012
2392012
High-sensitivity measurements of multiple kinase activities in live single cells
S Regot, JJ Hughey, BT Bajar, S Carrasco, MW Covert
Cell 157 (7), 1724-1734, 2014
2282014
Constraints-based models: regulation of gene expression reduces the steady-state solution space
MW Covert, BO Palsson
Journal of theoretical biology 221 (3), 309-325, 2003
2172003
Deep learning automates the quantitative analysis of individual cells in live-cell imaging experiments
DA Van Valen, T Kudo, KM Lane, DN Macklin, NT Quach, MM DeFelice, ...
PLoS computational biology 12 (11), e1005177, 2016
1952016
Reconstruction of microbial transcriptional regulatory networks
MJ Herrgård, MW Covert, BØ Palsson
Current opinion in biotechnology 15 (1), 70-77, 2004
1802004
Reconciling gene expression data with known genome-scale regulatory network structures
MJ Herrgård, MW Covert
Genome Research 13 (11), 2423-2434, 2003
1472003
Nonlytic viral spread enhanced by autophagy components
SW Bird, ND Maynard, MW Covert, K Kirkegaard
Proceedings of the National Academy of Sciences 111 (36), 13081-13086, 2014
1452014
A noisy paracrine signal determines the cellular NF-κB response to lipopolysaccharide
TK Lee, EM Denny, JC Sanghvi, JE Gaston, ND Maynard, JJ Hughey, ...
Science signaling 2 (93), ra65-ra65, 2009
1392009
Genome‐scale metabolic networks
M Terzer, ND Maynard, MW Covert, J Stelling
Wiley Interdisciplinary Reviews: Systems Biology and Medicine 1 (3), 285-297, 2009
1372009
Models and methods for determining systemic properties of regulated reaction networks
B Palsson, M Covert, C Schilling
US Patent App. 10/087,441, 2003
1362003
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Articles 1–20