Daniel J. Vis
Daniel J. Vis
Netherlands Cancer Institute, Amsterdam, The Netherlands
Verified email at nki.nl
Title
Cited by
Cited by
Year
Assessment of PLSDA cross validation
JA Westerhuis, HCJ Hoefsloot, S Smit, DJ Vis, AK Smilde, EJJ van Velzen, ...
Metabolomics 4 (1), 81-89, 2008
10532008
A landscape of pharmacogenomic interactions in cancer
F Iorio, TA Knijnenburg, DJ Vis, GR Bignell, MP Menden, M Schubert, ...
Cell 166 (3), 740-754, 2016
7652016
T-profiler: scoring the activity of predefined groups of genes using gene expression data
A Boorsma, BC Foat, D Vis, F Klis, HJ Bussemaker
Nucleic acids research 33 (suppl_2), W592-W595, 2005
2372005
Subunit composition of VRAC channels determines substrate specificity and cellular resistance to P t‐based anti‐cancer drugs
R Planells‐Cases, D Lutter, C Guyader, NM Gerhards, F Ullrich, DA Elger, ...
The EMBO journal 34 (24), 2993-3008, 2015
1362015
Integration of genomic, transcriptomic and proteomic data identifies two biologically distinct subtypes of invasive lobular breast cancer
M Michaut, SF Chin, I Majewski, TM Severson, T Bismeijer, L De Koning, ...
Scientific reports 6, 18517, 2016
1242016
Genome-wide analysis of yeast stress survival and tolerance acquisition to analyze the central trade-off between growth rate and cellular robustness
A Zakrzewska, G van Eikenhorst, JEC Burggraaff, DJ Vis, H Hoefsloot, ...
Molecular biology of the cell 22 (22), 4435-4446, 2011
1212011
Statistical validation of megavariate effects in ASCA
DJ Vis, JA Westerhuis, AK Smilde, J van der Greef
BMC bioinformatics 8 (1), 322, 2007
1082007
Dynamic metabolomic data analysis: a tutorial review
AK Smilde, JA Westerhuis, HCJ Hoefsloot, S Bijlsma, CM Rubingh, DJ Vis, ...
Metabolomics 6 (1), 3-17, 2010
982010
Phenotyping tea consumers by nutrikinetic analysis of polyphenolic end-metabolites
EJJ van Velzen, JA Westerhuis, JPM van Duynhoven, FA van Dorsten, ...
Journal of proteome research 8 (7), 3317-3330, 2009
982009
Intra‐and inter‐tumor heterogeneity in a vemurafenib‐resistant melanoma patient and derived xenografts
K Kemper, O Krijgsman, P Cornelissen‐Steijger, A Shahrabi, F Weeber, ...
EMBO molecular medicine 7 (9), 1104-1118, 2015
972015
Selective loss of PARG restores PARylation and counteracts PARP inhibitor-mediated synthetic lethality
E Gogola, AA Duarte, JR de Ruiter, WW Wiegant, JA Schmid, R de Bruijn, ...
Cancer cell 33 (6), 1078-1093. e12, 2018
892018
Facilitating a culture of responsible and effective sharing of cancer genome data
LL Siu, M Lawler, D Haussler, BM Knoppers, J Lewin, DJ Vis, RG Liao, ...
Nature medicine 22 (5), 464-471, 2016
752016
Patient-derived organoids can predict response to chemotherapy in metastatic colorectal cancer patients
SN Ooft, F Weeber, KK Dijkstra, CM McLean, S Kaing, E van Werkhoven, ...
Science Translational Medicine 11 (513), eaay2574, 2019
692019
MAP3K1 and MAP2K4 mutations are associated with sensitivity to MEK inhibitors in multiple cancer models
Z Xue, DJ Vis, A Bruna, T Sustic, S van Wageningen, AS Batra, ...
Cell research 28 (7), 719-729, 2018
482018
TANDEM: a two-stage approach to maximize interpretability of drug response models based on multiple molecular data types
N Aben, DJ Vis, M Michaut, LF Wessels
Bioinformatics 32 (17), i413-i420, 2016
482016
Multilevel models improve precision and speed of IC50 estimates
DJ Vis, L Bombardelli, H Lightfoot, F Iorio, MJ Garnett, LFA Wessels
Pharmacogenomics 17 (7), 691-700, 2016
312016
Identification of a druggable pathway controlling glioblastoma invasiveness
N Pencheva, MC de Gooijer, DJ Vis, LFA Wessels, T Würdinger, ...
Cell reports 20 (1), 48-60, 2017
262017
P athogenic and targetable genetic alterations in 70 urachal adenocarcinomas
H Reis, KE van der Vos, C Niedworok, T Herold, O Módos, A Szendrői, ...
International journal of cancer 143 (7), 1764-1773, 2018
172018
Analyzing metabolomics-based challenge tests
DJ Vis, JA Westerhuis, DM Jacobs, JPM van Duynhoven, S Wopereis, ...
Metabolomics 11 (1), 50-63, 2015
162015
Endocrine pulse identification using penalized methods and a minimum set of assumptions
DJ Vis, JA Westerhuis, HCJ Hoefsloot, H Pijl, F Roelfsema, ...
American Journal of Physiology-Endocrinology And Metabolism 298 (2), E146-E155, 2010
162010
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