| Stacks: an analysis tool set for population genomics J Catchen, PA Hohenlohe, S Bassham, A Amores, WA Cresko Molecular ecology 22 (11), 3124-3140, 2013 | 3185 | 2013 |
| Genome-wide genetic marker discovery and genotyping using next-generation sequencing JW Davey, PA Hohenlohe, PD Etter, JQ Boone, JM Catchen, ML Blaxter Nature Reviews Genetics 12 (7), 499-510, 2011 | 2641 | 2011 |
| Stacks: building and genotyping loci de novo from short-read sequences JM Catchen, A Amores, P Hohenlohe, W Cresko, JH Postlethwait G3: Genes, Genomes, Genetics 1 (3), 171-182, 2011 | 1888 | 2011 |
| Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags PA Hohenlohe, S Bassham, PD Etter, N Stiffler, EA Johnson, WA Cresko PLoS Genetics 6 (2), e1000862, 2010 | 1566 | 2010 |
| Genomics and the future of conservation genetics FW Allendorf, PA Hohenlohe, G Luikart Nature Reviews Genetics 11 (10), 697-709, 2010 | 1518 | 2010 |
| Harnessing the power of RADseq for ecological and evolutionary genomics KR Andrews, JM Good, MR Miller, G Luikart, PA Hohenlohe Nature Reviews Genetics 17 (2), 81-92, 2016 | 1326 | 2016 |
| Genomics and the origin of species O Seehausen, RK Butlin, I Keller, CE Wagner, JW Boughman, ... Nature Reviews Genetics 15 (3), 176-192, 2014 | 944 | 2014 |
| Harnessing genomics for delineating conservation units WC Funk, JK McKay, PA Hohenlohe, FW Allendorf Trends in ecology & evolution 27 (9), 489-496, 2012 | 922 | 2012 |
| Genotyping-by-sequencing in ecological and conservation genomics SR Narum, CA Buerkle, JW Davey, MR Miller, PA Hohenlohe Molecular ecology 22 (11), 2841, 2013 | 603 | 2013 |
| Resolving postglacial phylogeography using high-throughput sequencing KJ Emerson, CR Merz, JM Catchen, PA Hohenlohe, WA Cresko, ... Proceedings of the National Academy of Sciences 107 (37), 16196-16200, 2010 | 532 | 2010 |
| Estimating nonlinear selection gradients using quadratic regression coefficients: double or nothing? JR Stinchcombe, AF Agrawal, PA Hohenlohe, SJ Arnold, MW Blows Evolution 62 (9), 2435-2440, 2008 | 472 | 2008 |
| Next‐generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout PA HOHENLOHE, SJ AMISH, JM CATCHEN, FW ALLENDORF, ... Molecular Ecology Resources 11, 117-122, 2011 | 437 | 2011 |
| SNP discovery and genotyping for evolutionary genetics using RAD sequencing PD Etter, S Bassham, PA Hohenlohe, EA Johnson, WA Cresko Molecular Methods for Evolutionary Genetics, 157-178, 2011 | 425 | 2011 |
| UNDERSTANDING THE EVOLUTION AND STABILITY OF THE G‐MATRIX SJ Arnold, R Bürger, PA Hohenlohe, BC Ajie, AG Jones Evolution 62 (10), 2451-2461, 2008 | 400 | 2008 |
| Rapid evolution of a native species following invasion by a congener YE Stuart, TS Campbell, PA Hohenlohe, RG Reynolds, LJ Revell, ... Science 346 (6208), 463-466, 2014 | 334 | 2014 |
| Genetic diversity targets and indicators in the CBD post-2020 Global Biodiversity Framework must be improved S Hoban, M Bruford, JDU Jackson, M Lopes-Fernandes, M Heuertz, ... Biological Conservation 248, 108654, 2020 | 243 | 2020 |
| Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes PA Hohenlohe, S Bassham, M Currey, WA Cresko Philosophical Transactions of the Royal Society B: Biological Sciences 367 …, 2012 | 237 | 2012 |
| Multiple Sex-Associated Regions and a Putative Sex Chromosome in Zebrafish Revealed by RAD Mapping and Population Genomics JL Anderson, AR Marí, I Braasch, A Amores, P Hohenlohe, P Batzel, ... PloS one 7 (7), e40701, 2012 | 227 | 2012 |
| Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired‐end RAD sequencing PA Hohenlohe, MD Day, SJ Amish, MR Miller, N Kamps‐Hughes, ... Molecular ecology 22 (11), 3002-3013, 2013 | 212 | 2013 |
| Using population genomics to detect selection in natural populations: key concepts and methodological considerations PA Hohenlohe, PC Phillips, WA Cresko International journal of plant sciences 171 (9), 1059, 2010 | 204 | 2010 |
