Lars Dölken
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High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay
L Dölken, Z Ruzsics, B Rädle, CC Friedel, R Zimmer, J Mages, ...
Rna 14 (9), 1959-1972, 2008
Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast
C Miller, B Schwalb, K Maier, D Schulz, S Dümcke, B Zacher, A Mayer, ...
Molecular systems biology 7 (1), 458, 2011
Conserved principles of mammalian transcriptional regulation revealed by RNA half-life
CC Friedel, L Dölken, Z Ruzsics, UH Koszinowski, R Zimmer
Nucleic acids research 37 (17), e115-e115, 2009
CDK8 kinase phosphorylates transcription factor STAT1 to selectively regulate the interferon response
J Bancerek, ZC Poss, I Steinparzer, V Sedlyarov, T Pfaffenwimmer, ...
Immunity 38 (2), 250-262, 2013
Systematic analysis of viral and cellular microRNA targets in cells latently infected with human γ-herpesviruses by RISC immunoprecipitation assay
L Dölken, G Malterer, F Erhard, S Kothe, CC Friedel, G Suffert, ...
Cell host & microbe 7 (4), 324-334, 2010
Widespread disruption of host transcription termination in HSV-1 infection
AJ Rutkowski, F Erhard, A L’Hernault, T Bonfert, M Schilhabel, C Crump, ...
Nature communications 6 (1), 7126, 2015
The SARS-CoV-2 RNA–protein interactome in infected human cells
N Schmidt, CA Lareau, H Keshishian, S Ganskih, C Schneider, T Hennig, ...
Nature microbiology 6 (3), 339-353, 2021
Degradation of Cellular miR-27 by a Novel, Highly Abundant Viral Transcript Is Important for Efficient Virus Replication In Vivo
L Marcinowski, M Tanguy, A Krmpotic, B Rädle, VJ Lisnić, L Tuddenham, ...
PLoS pathogens 8 (2), e1002510, 2012
The phosphoproteome of toll‐like receptor‐activated macrophages
G Weintz, JV Olsen, K Frühauf, M Niedzielska, I Amit, J Jantsch, J Mages, ...
Molecular systems biology 6 (1), 371, 2010
Post-transcriptional regulation of miR-27 in murine cytomegalovirus infection
AH Buck, J Perot, MA Chisholm, DS Kumar, L Tuddenham, V Cognat, ...
Rna 16 (2), 307-315, 2010
Ultrashort and progressive 4sU-tagging reveals key characteristics of RNA processing at nucleotide resolution
L Windhager, T Bonfert, K Burger, Z Ruzsics, S Krebs, S Kaufmann, ...
Genome research 22 (10), 2031-2042, 2012
scSLAM-seq reveals core features of transcription dynamics in single cells
F Erhard, MAP Baptista, T Krammer, T Hennig, M Lange, P Arampatzi, ...
Nature 571 (7765), 419-423, 2019
4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response
K Burger, B Mühl, M Kellner, M Rohrmoser, A Gruber-Eber, L Windhager, ...
RNA biology 10 (10), 1623-1630, 2013
Improved Ribo-seq enables identification of cryptic translation events
F Erhard, A Halenius, C Zimmermann, A L'Hernault, DJ Kowalewski, ...
Nature methods 15 (5), 363-366, 2018
Mouse cytomegalovirus microRNAs dominate the cellular small RNA profile during lytic infection and show features of posttranscriptional regulation
L Dölken, J Perot, V Cognat, A Alioua, M John, J Soutschek, Z Ruzsics, ...
Journal of virology 81 (24), 13771-13782, 2007
Widespread context dependency of microRNA-mediated regulation
F Erhard, J Haas, D Lieber, G Malterer, L Jaskiewicz, M Zavolan, L Dölken, ...
Genome research 24 (6), 906-919, 2014
Prevalence and frequency of circulating t (14; 18)‐MBR translocation carrying cells in healthy individuals
F Schüler, L Dölken, C Hirt, T Kiefer, T Berg, G Fusch, K Weitmann, ...
International journal of cancer 124 (4), 958-963, 2009
Metabolic labeling of newly transcribed RNA for high resolution gene expression profiling of RNA synthesis, processing and decay in cell culture
B Rädle, AJ Rutkowski, Z Ruzsics, CC Friedel, UH Koszinowski, L Dölken
JoVE (Journal of Visualized Experiments), e50195, 2013
RC3H1 post-transcriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-κB pathway
Y Murakawa, M Hinz, J Mothes, A Schuetz, M Uhl, E Wyler, T Yasuda, ...
Nature communications 6 (1), 7367, 2015
Quantitative detection of t (14; 18)-positive cells by real-time quantitative PCR using fluorogenic probes
D Lars, S Frank, D Gottfried
Biotechniques 25 (6), 1058-1064, 1998
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