| The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible D Szklarczyk, JH Morris, H Cook, M Kuhn, S Wyder, M Simonovic, ... Nucleic acids research, gkw937, 2016 | 4157 | 2016 |
| STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets D Szklarczyk, AL Gable, D Lyon, A Junge, S Wyder, J Huerta-Cepas, ... Nucleic acids research 47 (D1), D607-D613, 2019 | 4029 | 2019 |
| Topological analysis and interactive visualization of biological networks and protein structures NT Doncheva, Y Assenov, FS Domingues, M Albrecht Nature protocols 7 (4), 670, 2012 | 391 | 2012 |
| Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis JZ Liu, JR Hov, T Folseraas, E Ellinghaus, SM Rushbrook, NT Doncheva, ... Nature genetics 45 (6), 670-675, 2013 | 319 | 2013 |
| Cytoscape stringApp: Network analysis and visualization of proteomics data NT Doncheva, JH Morris, J Gorodkin, LJ Jensen Journal of proteome research 18 (2), 623-632, 2018 | 298 | 2018 |
| Analyzing and visualizing residue networks of protein structures NT Doncheva, K Klein, FS Domingues, M Albrecht Trends in biochemical sciences 36 (4), 179-182, 2011 | 203 | 2011 |
| Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies D Ellinghaus, H Zhang, S Zeissig, S Lipinski, A Till, T Jiang, B Stade, ... Gastroenterology 145 (2), 339-347, 2013 | 141 | 2013 |
| Recent approaches to the prioritization of candidate disease genes NT Doncheva, T Kacprowski, M Albrecht Wiley Interdisciplinary Reviews: Systems Biology and Medicine 4 (5), 429-442, 2012 | 59 | 2012 |
| Viruses. STRING: A virus-host protein-protein interaction database H Cook, N Doncheva, D Szklarczyk, C von Mering, L Jensen Viruses 10 (10), 519, 2018 | 46 | 2018 |
| NetworkPrioritizer: a versatile tool for network-based prioritization of candidate disease genes or other molecules T Kacprowski, NT Doncheva, M Albrecht Bioinformatics 29 (11), 1471-1473, 2013 | 42 | 2013 |
| Profiling of Parkin-binding partners using tandem affinity purification A Zanon, A Rakovic, H Blankenburg, NT Doncheva, C Schwienbacher, ... PLoS ONE 8 (11), e78648, 2013 | 39 | 2013 |
| Abundant Genetic Overlap between Blood Lipids and Immune-Mediated Diseases Indicates Shared Molecular Genetic Mechanisms OA Andreassen, RS Desikan, Y Wang, WK Thompson, AJ Schork, ... PLoS ONE 10 (4), 2015 | 37 | 2015 |
| The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets D Szklarczyk, AL Gable, KC Nastou, D Lyon, R Kirsch, S Pyysalo, ... Nucleic Acids Research 49 (D1), D605-D612, 2021 | 21 | 2021 |
| Visualize omics data on networks with Omics Visualizer, a Cytoscape App M Legeay, NT Doncheva, JH Morris, LJ Jensen F1000Research 9, 2020 | 14 | 2020 |
| SetsApp for Cytoscape: Set operations for Cytoscape Nodes and Edges JH Morris, S Lotia, A Wu, NT Doncheva, M Albrecht, AR Pico, TE Ferrin F1000Research 3, 2014 | 10 | 2014 |
| setsApp for Cytoscape: Set operations for Cytoscape Nodes and Edges JH Morris, S Lotia, A Wu, NT Doncheva, M Albrecht, AR Pico, TE Ferrin F1000Research 3, 2014 | 10 | 2014 |
| SetsApp for Cytoscape: Set operations for Cytoscape Nodes and Edges JH Morris, S Lotia, A Wu, NT Doncheva, M Albrecht, AR Pico, TE Ferrin F1000Research 3, 2014 | 10 | 2014 |
| Consistent prediction of mutation effect on drug binding in HIV-1 protease using alchemical calculations T Bastys, V Gapsys, NT Doncheva, R Kaiser, BL de Groot, OV Kalinina Journal of chemical theory and computation 14 (7), 3397-3408, 2018 | 9 | 2018 |
| Integrative visual analysis of protein sequence mutations NT Doncheva, K Klein, JH Morris, M Wybrow, FS Domingues, M Albrecht BMC Proceedings 8 (Suppl 2), S2, 2014 | 9 | 2014 |
| Proceedings of the EuBIC-MS 2020 Developers’ Meeting C Ashwood, W Bittremieux, EW Deutsch, NT Doncheva, V Dorfer, ... EuPA Open Proteomics 24, 1-6, 2020 | 2 | 2020 |
John H MorrisUCSFVerified email at cgl.ucsf.edu
