| A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs MT Swain, IJ Tsai, SA Assefa, C Newbold, M Berriman, TD Otto Nature protocols 7 (7), 1260-1284, 2012 | 199 | 2012 |
| Genome sequence of the tsetse fly (Glossina morsitans): vector of African trypanosomiasis International Glossina Genome Initiative Science 344 (6182), 380-386, 2014 | 184 | 2014 |
| Whole genome analysis of a schistosomiasis-transmitting freshwater snail CM Adema, LDW Hillier, CS Jones, ES Loker, M Knight, P Minx, ... Nature communications 8 (1), 1-12, 2017 | 132 | 2017 |
| Grid-enabling data mining applications with DataMiningGrid: An architectural perspective V Stankovski, M Swain, V Kravtsov, T Niessen, D Wegener, J Kindermann, ... Future Generation Computer Systems 24 (4), 259-279, 2008 | 115 | 2008 |
| Protein and small non-coding RNA-enriched extracellular vesicles are released by the pathogenic blood fluke Schistosoma mansoni FC Nowacki, MT Swain, OI Klychnikov, U Niazi, A Ivens, JF Quintana, ... Journal of extracellular vesicles 4 (1), 28665, 2015 | 106 | 2015 |
| De novo assembly of red clover transcriptome based on RNA-Seq data provides insight into drought response, gene discovery and marker identification SA Yates, MT Swain, MJ Hegarty, I Chernukin, M Lowe, GG Allison, ... BMC genomics 15 (1), 1-15, 2014 | 106 | 2014 |
| Restriction and recruitment-gene duplication and the origin and evolution of snake venom toxins AD Hargreaves, MT Swain, MJ Hegarty, DW Logan, JF Mulley Genome Biology and Evolution 6 (8), 2088-2095, 2014 | 106 | 2014 |
| A metagenomic snapshot of taxonomic and functional diversity in an alpine glacier cryoconite ecosystem A Edwards, JA Pachebat, M Swain, M Hegarty, AJ Hodson, ... Environmental Research Letters 8 (3), 035003, 2013 | 87 | 2013 |
| Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement JJ De Vega, S Ayling, M Hegarty, D Kudrna, JL Goicoechea, Å Ergon, ... Scientific reports 5 (1), 1-10, 2015 | 82 | 2015 |
| Presence of extensive Wolbachia symbiont insertions discovered in the genome of its host Glossina morsitans morsitans C Brelsfoard, G Tsiamis, M Falchetto, LM Gomulski, E Telleria, U Alam, ... PLoS Negl Trop Dis 8 (4), e2728, 2014 | 69* | 2014 |
| Upgrading short-read animal genome assemblies to chromosome level using comparative genomics and a universal probe set J Damas, R O'connor, M Farré, VPE Lenis, HJ Martell, A Mandawala, ... Genome research 27 (5), 875-884, 2017 | 63 | 2017 |
| Testing the Toxicofera: comparative transcriptomics casts doubt on the single, early evolution of the reptile venom system AD Hargreaves, MT Swain, DW Logan, JF Mulley Toxicon 92, 140-156, 2014 | 54 | 2014 |
| Generation of whole genome sequences of new Cryptosporidium hominis and Cryptosporidium parvum isolates directly from stool samples SJ Hadfield, JA Pachebat, MT Swain, G Robinson, SJS Cameron, ... Bmc Genomics 16 (1), 1-12, 2015 | 49 | 2015 |
| Complex system simulations with qoscosgrid K Kurowski, W de Back, W Dubitzky, L Gulyás, G Kampis, M Mamonski, ... Computational Science–ICCS 2009, 387-396, 2009 | 47 | 2009 |
| Epigenetic regulation of sex ratios may explain natural variation in self-fertilization rates A Ellison, CM Rodriguez Lopez, P Moran, J Breen, M Swain, M Megias, ... Proceedings of the Royal Society B: Biological Sciences 282 (1819), 20151900, 2015 | 39 | 2015 |
| Correlation between bacterial G+ C content, genome size and the G+ C content of associated plasmids and bacteriophages A Almpanis, M Swain, D Gatherer, N McEwan Microbial genomics 4 (4), 2018 | 36 | 2018 |
| Digging deep into the data mine with DataMiningGrid V Stankovski, M Swain, V Kravtsov, T Niessen, D Wegener, M Röhm, ... IEEE internet computing 12 (6), 69-76, 2008 | 35 | 2008 |
| Comparative study of three commonly used continuous deterministic methods for modeling gene regulation networks M Swain, J Mandel, W Dubitzky BMC bioinformatics 11 (1), 459, 2010 | 32 | 2010 |
| Evolutionary genomics of anthroponosis in Cryptosporidium JL Nader, TC Mathers, BJ Ward, JA Pachebat, MT Swain, G Robinson, ... Nature microbiology 4 (5), 826-836, 2019 | 30 | 2019 |
| Schistosoma comparative genomics: integrating genome structure, parasite biology and anthelmintic discovery MT Swain, DM Larkin, CR Caffrey, SJ Davies, A Loukas, PJ Skelly, ... Trends in parasitology 27 (12), 555-564, 2011 | 29 | 2011 |
Matthew HegartyAberystwyth UniversityVerified email at aber.ac.uk
