| Linking bacterial population dynamics and nutrient removal in the granular sludge biofilm ecosystem engineered for wastewater treatment DG Weissbrodt, N Shani, C Holliger FEMS microbiology ecology 88 (3), 579-595, 2014 | 138 | 2014 |
| Diacetylphloroglucinol-producing pseudomonads do not influence AM fungi in wheat rhizosphere R Gaur, N Shani, Kawaljeet, BN Johri, P Rossi, M Aragno Current Science, 453-457, 2004 | 110 | 2004 |
| DAIRYdb: a manually curated reference database for improved taxonomy annotation of 16S rRNA gene sequences from dairy products M Meola, E Rifa, N Shani, C Delbès, H Berthoud, C Chassard BMC genomics 20, 1-16, 2019 | 46 | 2019 |
| Correlations between environmental variables and bacterial community structures suggest Fe (III) and vinyl chloride reduction as antagonistic terminal electron-accepting processes N Shani, P Rossi, C Holliger Environmental science & technology 47 (13), 6836-6845, 2013 | 39 | 2013 |
| PyroTRF-ID: a novel bioinformatics methodology for the affiliation of terminal-restriction fragments using 16S rRNA gene pyrosequencing data DG Weissbrodt, N Shani, L Sinclair, G Lefebvre, P Rossi, J Maillard, ... BMC microbiology 12, 1-18, 2012 | 36 | 2012 |
| Characterization of groundwater microbial communities, dechlorinating bacteria, and in situ biodegradation of chloroethenes along a vertical gradient G Imfeld, H Pieper, N Shani, P Rossi, M Nikolausz, I Nijenhuis, H Paschke, ... Water, Air, & Soil Pollution 221, 107-122, 2011 | 36 | 2011 |
| High-throughput qPCR and 16S rRNA gene amplicon sequencing as complementary methods for the investigation of the cheese microbiota M Dreier, M Meola, H Berthoud, N Shani, D Wechsler, P Junier BMC microbiology 22 (1), 48, 2022 | 22 | 2022 |
| SpeciesPrimer: a bioinformatics pipeline dedicated to the design of qPCR primers for the quantification of bacterial species M Dreier, H Berthoud, N Shani, D Wechsler, P Junier PeerJ 8, e8544, 2020 | 19 | 2020 |
| Ecology and biogeography of bacterial communities associated with chloroethene-contaminated aquifers P Rossi, N Shani, F Kohler, G Imfeld, C Holliger Frontiers in microbiology 3, 260, 2012 | 19 | 2012 |
| Antibiotic susceptibility profiles of Pediococcus pentosaceus from various origins and their implications for the safety assessment of strains with food-technology applications N Shani, S Oberhaensli, E Arias-Roth Journal of food protection 84 (7), 1160-1168, 2021 | 18 | 2021 |
| Update on tetracycline susceptibility of Pediococcus acidilactici based on strains isolated from swiss cheese and whey P Lüdin, A Roetschi, D Wüthrich, R Bruggmann, H Berthoud, N Shani Journal of food protection 81 (10), 1582-1589, 2018 | 15 | 2018 |
| Evaluation of a new culture medium for the enumeration and isolation of Streptococcus salivarius subsp. thermophilus from cheese N Shani, D Isolini, D Marzohl, H Berthoud Food Microbiology 95, 103672, 2021 | 11 | 2021 |
| Assessing the bacterial ecology of organohalide respiration for the design of bioremediation strategies N Shani EPFL, 2012 | 11 | 2012 |
| Impact assessment of pumping parameters on groundwater bacterial communities N Shani, V Aravinthan, P Rossi, G Laulan, P Ducommun, C Holliger Groundwater Monitoring & Remediation 33 (2), 31-37, 2013 | 8 | 2013 |
| Development of a high-throughput microfluidic qPCR system for the quantitative determination of quality-relevant bacteria in cheese M Dreier, H Berthoud, N Shani, D Wechsler, P Junier Frontiers in Microbiology 11, 619166, 2021 | 7 | 2021 |
| Measuring antibiotic resistance in mixed cultures: Isothermal microcalorimetry as a novel analytical tool U von Ah, N Shani, M Chollet, A Solokhina, O Braissant International dairy journal 77, 73-79, 2018 | 6 | 2018 |
| OpenGenomeBrowser: a versatile, dataset-independent and scalable web platform for genome data management and comparative genomics T Roder, S Oberhänsli, N Shani, R Bruggmann BMC genomics 23 (1), 855, 2022 | 5 | 2022 |
| Antimicrobial Susceptibility of Lactobacillus delbrueckii subsp. lactis from Milk Products and Other Habitats N Shani, S Oberhaensli, H Berthoud, RS Schmidt, HP Bachmann Foods 10 (12), 3145, 2021 | 5 | 2021 |
| Sicherheitsabklärungen für die Liebefelder Kulturen HP Bachmann, C Kohn, U von Ah, N Shani Agrarforschung Schweiz 10 (7-8), 290-297, 2019 | 3 | 2019 |
| Charakterisierung von Walliser Raclette GUB D Wechsler, N Fehér, J Haldemann, M Meola, D Guggisberg, ... Agroscope Science 115, 1-47, 2021 | 2 | 2021 |
