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Manuel Lladser
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UniFrac: an effective distance metric for microbial community comparison
C Lozupone, ME Lladser, D Knights, J Stombaugh, R Knight
The ISME Journal 5 (2), 169, 2011
25692011
Balance trees reveal microbial niche differentiation
JT Morton, J Sanders, RA Quinn, D McDonald, A Gonzalez, ...
MSystems 2 (1), e00162-16, 2017
2212017
Domain of attraction of the quasi-stationary distributions for the Ornstein-Uhlenbeck process
M Lladser, J San Martín
Journal of Applied Probability 37 (2), 511-521, 2000
502000
Multiple pattern matching: A Markov chain approach
ME Lladser, MD Betterton, R Knight
Journal of Mathematical Biology 56 (1-2), 51-92, 2008
482008
Getting the lay of the land in discrete space: A survey of metric dimension and its applications
RC Tillquist, RM Frongillo, ME Lladser
SIAM Review 65 (4), 919-962, 2023
402023
Extrapolation of urn models via poissonization: Accurate measurements of the microbial unknown
ME Lladser, R Gouet, J Reeder
PloS ONE 6 (6), e21105, 2011
312011
Low-dimensional representation of genomic sequences
RC Tillquist, ME Lladser
Journal of Mathematical Biology, 2019
272019
An annotation agnostic algorithm for detecting nascent RNA transcripts in GRO-seq
JG Azofeifa, MA Allen, ME Lladser, RD Dowell
IEEE/ACM transactions on computational biology and bioinformatics 14 (5 …, 2016
242016
Natural and artificial RNAs occupy the same restricted region of sequence space
R Kennedy, ME Lladser, Z Wu, C Zhang, M Yarus, H De Sterck, R Knight
RNA Journal 16 (2), 280-289, 2010
232010
Chiral histidine selection by D-ribose RNA
M Illangasekare, R Turk, GC Peterson, M Lladser, M Yarus
RNA Journal 16 (12), 2370-2383, 2010
192010
Information, probability, and the abundance of the simplest RNA active sites
R Kennedy, ME Lladser, M Yarus, R Knight
Frontiers in Bioscience 13, 6060-6071, 2008
182008
Minimal Markov chain embeddings of pattern problems
ME Lladser
Information Theory and Applications Workshop, 2007, 251-255, 2007
182007
FStitch: A fast and simple algorithm for detecting nascent RNA transcripts
J Azofeifa, MA Allen, M Lladser, R Dowell
5th ACM Conference on Bioinformatics, Computational Biology, and Health …, 2014
132014
Asymptotic enumeration via singularity analysis
ME Lladser
The Ohio State University, 2003
132003
Truncated metric dimension for finite graphs
RC Tillquist, RM Frongillo, ME Lladser
arXiv preprint arXiv:2106.14314, 2021
122021
Comparison of methods for estimating the nucleotide substitution matrix
M Oscamou, D McDonald, VB Yap, GA Huttley, ME Lladser, R Knight
BMC Bioinformatics 9 (1), 511, 2008
122008
Uniform formulae for coefficients of meromorphic functions in two variables. Part I
M Lladser
SIAM Journal on Discrete Mathematics 20 (4), 811-828, 2006
122006
Resolvability of Hamming graphs
L Laird, RC Tillquist, S Becker, ME Lladser
SIAM Journal on Discrete Mathematics 34 (4), 2063-2081, 2020
112020
RNA Pol II transcription model and interpretation of GRO-seq data
ME Lladser, JG Azofeifa, MA Allen, RD Dowell
Journal of Mathematical Biology, 2016
102016
Approximation of sojourn-times via maximal couplings: motif frequency distributions
ME Lladser, SR Chestnut
Journal of Mathematical Biology 69 (1), 147-182, 2014
102014
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