| High-avidity IgA protects the intestine by enchaining growing bacteria K Moor, M Diard, ME Sellin, B Felmy, SY Wotzka, A Toska, E Bakkeren, ... Nature 544 (7651), 498-502, 2017 | 382 | 2017 |
| Salmonella persisters promote the spread of antibiotic resistance plasmids in the gut E Bakkeren, JS Huisman, SA Fattinger, A Hausmann, M Furter, A Egli, ... Nature 573 (7773), 276-280, 2019 | 206 | 2019 |
| Inflammation boosts bacteriophage transfer between Salmonella spp. M Diard, E Bakkeren, JK Cornuault, K Moor, A Hausmann, ME Sellin, ... Science 355 (6330), 1211-1215, 2017 | 183 | 2017 |
| Evolutionary causes and consequences of bacterial antibiotic persistence E Bakkeren, M Diard, WD Hardt Nature Reviews Microbiology 18 (9), 479-490, 2020 | 167 | 2020 |
| Escherichia coli limits Salmonella Typhimurium infections after diet shifts and fat-mediated microbiota perturbation in mice SY Wotzka, M Kreuzer, L Maier, M Arnoldini, BD Nguyen, AO Brachmann, ... Nature microbiology 4 (12), 2164-2174, 2019 | 118* | 2019 |
| Intestinal epithelial NAIP/NLRC4 restricts systemic dissemination of the adapted pathogen Salmonella Typhimurium due to site-specific bacterial PAMP expression A Hausmann, D Böck, P Geiser, DL Berthold, SA Fattinger, M Furter, ... Mucosal Immunology 13 (3), 530-544, 2020 | 110 | 2020 |
| Plasmid-and strain-specific factors drive variation in ESBL-plasmid spread in vitro and in vivo F Benz, JS Huisman, E Bakkeren, JA Herter, T Stadler, M Ackermann, ... The ISME Journal, 1-17, 2020 | 88 | 2020 |
| Microbiome diversity protects against pathogens by nutrient blocking F Spragge, E Bakkeren, MT Jahn, E BN Araujo, CF Pearson, X Wang, ... Science 382 (6676), eadj3502, 2023 | 68 | 2023 |
| Epithelium-autonomous NAIP/NLRC4 prevents TNF-driven inflammatory destruction of the gut epithelial barrier in Salmonella-infected mice SA Fattinger, P Geiser, PS Ventayol, ML Di Martino, M Furter, B Felmy, ... Mucosal immunology 14 (3), 615-629, 2021 | 58 | 2021 |
| The endosomal sorting complex required for transport machinery influences haem uptake and capsule elaboration in Cryptococcus neoformans G Hu, M Caza, B Cadieux, E Bakkeren, E Do, WH Jung, JW Kronstad Molecular microbiology 96 (5), 973-992, 2015 | 53 | 2015 |
| A P4‐ATPase subunit of the Cdc50 family plays a role in iron acquisition and virulence in Cryptococcus neoformans G Hu, M Caza, E Bakkeren, M Kretschmer, G Bairwa, E Reiner, J Kronstad Cellular microbiology 19 (6), e12718, 2017 | 30 | 2017 |
| Impact of horizontal gene transfer on emergence and stability of cooperative virulence in Salmonella Typhimurium E Bakkeren, E Gül, JS Huisman, Y Steiger, A Rocker, WD Hardt, M Diard Nature Communications 13 (1), 1-13, 2022 | 28* | 2022 |
| A rationally designed oral vaccine induces Immunoglobulin A in the murine gut that directs the evolution of attenuated Salmonella variants M Diard, E Bakkeren, V Lentsch, A Rocker, NA Bekele, D Hoces, S Aslani, ... Nature Microbiology, 1-12, 2021 | 28* | 2021 |
| Pathogen invasion-dependent tissue reservoirs and plasmid-encoded antibiotic degradation boost plasmid spread in the gut E Bakkeren, JA Herter, JS Huisman, Y Steiger, E Gül, JPM Newson, ... eLife 10, e69744, 2021 | 15 | 2021 |
| Vam6/Vps39/TRAP1‐domain proteins influence vacuolar morphology, iron acquisition and virulence in Cryptococcus neoformans G Hu, E Bakkeren, M Caza, L Horianopoulos, E Sánchez‐León, ... Cellular microbiology 23 (12), e13400, 2021 | 10 | 2021 |
| Differences in carbon metabolic capacity fuel co-existence and plasmid transfer between Salmonella strains in the mouse gut E Gül, A Abi Younes, J Huuskonen, C Diawara, BD Nguyen, L Maurer, ... Cell Host & Microbe 31 (7), 1140-1153. e3, 2023 | 9 | 2023 |
| Detection of mutations affecting heterogeneously expressed phenotypes by colony immunoblot and dedicated semi-automated image analysis pipeline E Bakkeren, T Dolowschiak, M RJ Diard Frontiers in microbiology 8, 2044, 2017 | 7 | 2017 |
| The microbiota conditions a gut milieu that selects for wild-type Salmonella Typhimurium virulence E Gül, E Bakkeren, G Salazar, Y Steiger, A Abi Younes, M Clerc, ... PLoS biology 21 (8), e3002253, 2023 | 5 | 2023 |
| The mobilizable plasmid P3 of Salmonella enterica serovar Typhimurium SL1344 depends on the P2 plasmid for conjugative transfer into a broad range of bacteria in vitro and in vivo MS Gaissmaier, L Laganenka, MKM Herzog, E Bakkeren, WD Hardt Journal of Bacteriology 204 (12), e00347-22, 2022 | 4 | 2022 |
| The zinc ion-chelating agent TPEN reduces the CpxP-mediated negative regulation of the CpxAR two-component system in Escherichia coli KML Cramb, E Bakkeren, I Refaeli, D Oliver Microbiology & Immunology 1, 1-8, 2015 | 2 | 2015 |
