| Temporal and spatial variation of the human microbiota during pregnancy DB DiGiulio, BJ Callahan, PJ McMurdie, EK Costello, DJ Lyell, ... Proceedings of the National Academy of Sciences 112 (35), 11060-11065, 2015 | 1127 | 2015 |
| Clades of huge phages from across Earth’s ecosystems B Al-Shayeb, R Sachdeva, LX Chen, F Ward, P Munk, A Devoto, ... Nature 578 (7795), 425-431, 2020 | 387 | 2020 |
| Replication and refinement of a vaginal microbial signature of preterm birth in two racially distinct cohorts of US women BJ Callahan, DB DiGiulio, DSA Goltsman, CL Sun, EK Costello, ... Proceedings of the National Academy of Sciences 114 (37), 9966-9971, 2017 | 353 | 2017 |
| Major bacterial lineages are essentially devoid of CRISPR-Cas viral defence systems D Burstein, CL Sun, CT Brown, I Sharon, K Anantharaman, AJ Probst, ... Nature communications 7 (1), 1-8, 2016 | 224 | 2016 |
| Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, USA H Cadillo‐Quiroz, S Bräuer, E Yashiro, C Sun, J Yavitt, S Zinder Environmental microbiology 8 (8), 1428-1440, 2006 | 222 | 2006 |
| Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing “Leptospirillum rubarum”(Group II) and “Leptospirillum ferrodiazotrophum”(Group III) bacteria in … DSA Goltsman, VJ Denef, SW Singer, NC VerBerkmoes, M Lefsrud, ... Applied and environmental microbiology 75 (13), 4599-4615, 2009 | 219 | 2009 |
| Strong bias in the bacterial CRISPR elements that confer immunity to phage D Paez-Espino, W Morovic, CL Sun, BC Thomas, K Ueda, B Stahl, ... Nature communications 4 (1), 1-7, 2013 | 202 | 2013 |
| Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time DT Pride, CL Sun, J Salzman, N Rao, P Loomer, GC Armitage, ... Genome research 21 (1), 126-136, 2011 | 175 | 2011 |
| Persisting viral sequences shape microbial CRISPR-based immunity AD Weinberger, CL Sun, MM Pluciński, VJ Denef, BC Thomas, P Horvath, ... PLoS computational biology 8 (4), 2012 | 157 | 2012 |
| Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome DSA Goltsman, CL Sun, DM Proctor, DB DiGiulio, A Robaczewska, ... Genome research 28 (10), 1467-1480, 2018 | 134 | 2018 |
| Phage mutations in response to CRISPR diversification in a bacterial population CL Sun, R Barrangou, BC Thomas, P Horvath, C Fremaux, JF Banfield Environmental microbiology 15 (2), 463-470, 2013 | 126 | 2013 |
| Metagenomic reconstructions of bacterial CRISPR loci constrain population histories CL Sun, BC Thomas, R Barrangou, JF Banfield The ISME journal 10 (4), 858-870, 2016 | 85 | 2016 |
| Novel microbial diversity and functional potential in the marine mammal oral microbiome NK Dudek, CL Sun, D Burstein, RS Kantor, DSA Goltsman, EM Bik, ... Current Biology 27 (24), 3752-3762. e6, 2017 | 83 | 2017 |
| Heterotrophic archaea contribute to carbon cycling in low-pH, suboxic biofilm communities NB Justice, C Pan, R Mueller, SE Spaulding, V Shah, CL Sun, AP Yelton, ... Applied and environmental microbiology 78 (23), 8321-8330, 2012 | 60 | 2012 |
| Seasonal changes in methanogenesis and methanogenic community in three peatlands, New York State CL Sun, SL Brauer, H Cadillo Quiroz, SH Zinder, JB Yavitt Frontiers in microbiology 3, 81, 2012 | 59 | 2012 |
| Soil–methanogen interactions in two peatlands (bog, fen) in Central New York State MD Dettling, JB Yavitt, H Cadillo-Quiroz, C Sun, SH Zinder Geomicrobiology Journal 24 (3-4), 247-259, 2007 | 29 | 2007 |
| Microbiota's' little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome CL Sun, DA Relman Genome biology 14 (7), 1-3, 2013 | 19 | 2013 |
| Candidatus Mycoplasma girerdii replicates, diversifies, and co-occurs with Trichomonas vaginalis in the oral cavity of a premature infant EK Costello, CL Sun, EM Carlisle, MJ Morowitz, JF Banfield, DA Relman Scientific reports 7 (1), 1-11, 2017 | 18 | 2017 |
| Quantitative stable-isotope probing (qSIP) with metagenomics links microbial physiology and activity to soil moisture in Mediterranean-climate grassland ecosystems A Greenlon, E Sieradzki, O Zablocki, BJ Koch, MM Foley, JA Kimbrel, ... Msystems, e00417-22, 2022 | 16 | 2022 |
| Genome‐resolved viral ecology in a marine oxygen minimum zone D Vik, MC Gazitúa, CL Sun, AA Zayed, M Aldunate, MR Mulholland, ... Environmental Microbiology 23 (6), 2858-2874, 2021 | 13 | 2021 |
