Mark D. Robinson

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Charlotte SonesonResearch Associate, FMI, BaselVerified email at fmi.ch
Gordon K SmythDivision Head, Bioinformatics, Walter and Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
Davis J McCarthyHead, Bioinformatics and Cellular Genomics, St Vincent's Institute of Medical ResearchVerified email at svi.edu.au
Lukas M. WeberPostdoctoral Fellow, Department of Biostatistics, Johns Hopkins UniversityVerified email at jhu.edu
Timothy R. HughesUniversity of TorontoVerified email at utoronto.ca
susan j clarkprofessor Garvan institute of medical researchVerified email at garvan.org.au
Carsten KriegAssistant Professor of Immunology, MUSC, Charleston, SCVerified email at cktherapeutics.com
Helena L. CrowellPhD candidate, University of Zurich, SwitzerlandVerified email at uzh.ch
Clare StirzakerGarvan Institute of Medical ResearchVerified email at garvan.org.au
Silvia GugliettaAssistant Professor of Immunology, Medical University of South Carolina, USAVerified email at musc.edu
Alicia OshlackPeter MacCallum Cancer CentreVerified email at petermac.org
Michael I. LoveAssociate Professor, Biostatistics & Genetics, UNC-Chapel HillVerified email at email.unc.edu
Christian MosimannJohnson Chair, Associate Professor, University of Colorado School of Medicine AMCVerified email at cuanschutz.edu
Alexa BurgerUniversity of Colorado Anschutz Medical CampusVerified email at cuanschutz.edu
Yunshun ChenLaboratory Head, Walter and Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
Quaid MorrisComputational and Systems Biology Program, Memorial Sloan Kettering Cancer CenterVerified email at mskcc.org
Charity W LawThe Walter and Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
Lieven ClementAssociate Professor in Statistical Genomics, Ghent UniversityVerified email at ugent.be
Matthew D YoungWellcome Sanger InstituteVerified email at sanger.ac.uk
Simon AndersBioquant Center, University of HeidelbergVerified email at fs.tum.de

Mark D. Robinson

Associate Professor of Statistical Genomics, University of Zurich

Verified email at imls.uzh.ch - Homepage

Statistics Bioinformatics Transcriptomics Single-Cell Data Analysis Epigenomics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data MD Robinson, DJ McCarthy, GK Smyth bioinformatics 26 (1), 139-140, 2010	32524	2010
Comprehensive genomic characterization defines human glioblastoma genes and core pathways Cancer Genome Atlas Research Network Tissue source sites: Duke University ... Nature 455 (7216), 1061-1068, 2008	7032	2008
A scaling normalization method for differential expression analysis of RNA-seq data MD Robinson, A Oshlack Genome biology 11 (3), 1-9, 2010	7030	2010
Global landscape of protein complexes in the yeast Saccharomyces cerevisiae NJ Krogan, G Cagney, H Yu, G Zhong, X Guo, A Ignatchenko, J Li, S Pu, ... Nature 440 (7084), 637-643, 2006	3365	2006
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences C Soneson, MI Love, MD Robinson F1000 Research 4, 1521, 2015	2903	2015
Systematic genetic analysis with ordered arrays of yeast deletion mutants AHY Tong, M Evangelista, AB Parsons, H Xu, GD Bader, N Pagé, ... Science 294 (5550), 2364-2368, 2001	2528	2001
Small-sample estimation of negative binomial dispersion, with applications to SAGE data MD Robinson, GK Smyth Biostatistics 9 (2), 321-332, 2008	1269	2008
Count-based differential expression analysis of RNA sequencing data using R and Bioconductor S Anders, DJ McCarthy, Y Chen, M Okoniewski, GK Smyth, W Huber, ... Nature Protocols 8 (9), 1765-86, 2013	1229	2013
Large-scale mapping of human protein-protein interactions by mass spectrometry RM Ewing, P Chu, F Elisma, H Li, P Taylor, S Climie, ... Molecular systems biology 3 (1), 2007	1197	2007
Moderated statistical tests for assessing differences in tag abundance MD Robinson, GK Smyth Bioinformatics 23 (21), 2881-2887, 2007	1070	2007
From RNA-seq reads to differential expression results A Oshlack, MD Robinson, MD Young Genome biology 11, 1-10, 2010	913	2010
High-throughput mapping of a dynamic signaling network in mammalian cells M Barrios-Rodiles, KR Brown, B Ozdamar, R Bose, Z Liu, RS Donovan, ... Science 307 (5715), 1621-1625, 2005	860	2005
Eleven grand challenges in single-cell data science D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... Genome biology 21 (1), 1-35, 2020	785	2020
Bias, robustness and scalability in single-cell differential expression analysis C Soneson, MD Robinson Nature methods 15 (4), 255-261, 2018	623	2018
High-dimensional single-cell analysis predicts response to anti-PD-1 immunotherapy C Krieg, M Nowicka, S Guglietta, S Schindler, FJ Hartmann, LM Weber, ... Nature Medicine 24, 144–153, 2018	609	2018
FunSpec: a web-based cluster interpreter for yeast MD Robinson, J Grigull, N Mohammad, TR Hughes BMC bioinformatics 3 (1), 1-5, 2002	502	2002
High-definition macromolecular composition of yeast RNA-processing complexes NJ Krogan, WT Peng, G Cagney, MD Robinson, R Haw, G Zhong, X Guo, ... Molecular cell 13 (2), 225-239, 2004	463	2004
Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters LF Wu, TR Hughes, AP Davierwala, MD Robinson, R Stoughton, ... Nature genetics 31 (3), 255-265, 2002	427	2002
Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors J Grigull, S Mnaimneh, J Pootoolal, MD Robinson, TR Hughes Molecular and cellular biology, 2004	420	2004
Robustly detecting differential expression in RNA sequencing data using observation weights X Zhou, H Lindsay, MD Robinson Nucleic acids research 42 (11), e91-e91, 2014	419	2014

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