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Mark D. Robinson
Mark D. Robinson
Full Professor of Statistical Genomics, University of Zurich
Verified email at mls.uzh.ch - Homepage
Title
Cited by
Year
Molecular maps of synovial cells in inflammatory arthritis using an optimized synovium dissociation protocol
SG Edalat, R Gerber, M Houtman, J Lückgen, RL Teixeira, MPP Cisneros, ...
iScience, 109707, 2024
2024
On the identification of differentially-active transcription factors from ATAC-seq data
F Gerbaldo, E Sonder, V Fischer, S Frei, J Wang, K Gapp, MD Robinson, ...
bioRxiv, 2024.03. 06.583825, 2024
2024
Ten simple rules for collaborating with wet lab researchers for computational researchers
MD Robinson, P Cai, M Emons, R Gerber, PL Germain, S Gunz, S Luo, ...
arXiv preprint arXiv:2402.18348, 2024
2024
A model of human neural networks reveals NPTX2 pathology in ALS and FTLD
M Hruska-Plochan, VI Wiersma, KM Betz, I Mallona, S Ronchi, ...
Nature 626 (8001), 1073-1083, 2024
14*2024
DESpace: spatially variable gene detection via differential expression testing of spatial clusters
P Cai, MD Robinson, S Tiberi
Bioinformatics 40 (2), btae027, 2024
2024
TTF1 control of LncRNA synthesis and cell growth delineates a tumour suppressor pathway acting directly on the ribosomal RNA Genes
DS Sibai, MG Tremblay, F Lessard, C Tav, M Sabourin-Félix, ...
bioRxiv, 2024.02. 11.579707, 2024
2024
Perceptual and technical barriers in sharing and formatting metadata accompanying omics studies
YN Huang, MI Love, CF Ronkowski, D Deshpande, LM Schriml, ...
arXiv preprint arXiv:2401.02965, 2023
2023
RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing
A Moursy, A Cléry, S Gerhardy, KM Betz, S Rao, J Mazur, S Campagne, ...
Nature Communications 14 (1), 7166, 2023
2023
Validation of hypermethylated DNA regions found in colorectal cancers as potential aging-independent biomarkers of precancerous colorectal lesions
S Sajibu, E Sonder, A Tiwari, S Orjuela, HR Parker, OT Frans, C Gubler, ...
BMC cancer 23 (1), 998, 2023
12023
228 The multi-faceted role of complement C3aR in the development and treatment of colorectal cancer
C Krieg, LM Weber, B Fosso, G Hardiman, M Olcina, K Mallah, E Domingo, ...
Immunobiology 228 (5), 152678, 2023
2023
DifferentialRegulation: a Bayesian hierarchical approach to identify differentially regulated genes
S Tiberi, J Meili, P Cai, C Soneson, D He, H Sarkar, A Avalos-Pacheco, ...
bioRxiv, 2023
2023
Conserved stromal–immune cell circuits secure B cell homeostasis and function
M Lütge, A De Martin, C Gil-Cruz, C Perez-Shibayama, Y Stanossek, ...
Nature Immunology 24 (7), 1149-1160, 2023
72023
Gapless provides combined scaffolding, gap filling, and assembly correction with long reads
S Schmeing, MD Robinson
Life science alliance 6 (7), 2023
32023
Meta-analysis of (single-cell method) benchmarks reveals the need for extensibility and interoperability
A Sonrel, A Luetge, C Soneson, I Mallona, PL Germain, S Knyazev, J Gilis, ...
Genome Biology 24 (1), 119, 2023
72023
Transformation of alignment files improves performance of variant callers for long-read RNA sequencing data
VBC de Souza, BT Jordan, E Tseng, EA Nelson, KK Hirschi, ...
Genome Biology 24 (1), 91, 2023
42023
Rbm8a deficiency causes hematopoietic defects by modulating Wnt/PCP signaling
A Kocere, E Chiavacci, C Soneson, HH Wells, KM Méndez-Acevedo, ...
bioRxiv, 2023
22023
The shaky foundations of simulating single-cell RNA sequencing data
HL Crowell, SX Morillo Leonardo, C Soneson, MD Robinson
Genome Biology 24 (1), 62, 2023
24*2023
SampleQC: robust multivariate, multi-cell type, multi-sample quality control for single-cell data
W Macnair, M Robinson
Genome Biology 24 (1), 23, 2023
62023
Validation of hypermethylated DNA regions found in colorectal cancers as potential aging-independent biomarkers of precancerous colorectal lesions
C Gubler, G Marra, MD Robinson
2023
Benchmarking computational methods for single-cell chromatin data analysis
S Luo, PL Germain, MD Robinson, F von Meyenn
bioRxiv, 2023.08. 04.552046, 2023
2023
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