| Emergence of genomic diversity and recurrent mutations in SARS-CoV-2 L Van Dorp, M Acman, D Richard, LP Shaw, CE Ford, L Ormond, ... Infection, Genetics and Evolution 83, 104351, 2020 | 896 | 2020 |
| No evidence for increased transmissibility from recurrent mutations in SARS-CoV-2 L van Dorp, D Richard, CCS Tan, LP Shaw, M Acman, F Balloux Nature communications 11 (1), 5986, 2020 | 366 | 2020 |
| Transmission of SARS-CoV-2 from humans to animals and potential host adaptation CCS Tan, SD Lam, D Richard, CJ Owen, D Berchtold, C Orengo, MS Nair, ... Nature Communications 13 (1), 2988, 2022 | 87 | 2022 |
| Intra‐individual polymorphism in chloroplasts from NGS data: Where does it come from and how to handle it? N Scarcelli, C Mariac, TLP Couvreur, A Faye, D Richard, F Sabot, ... Molecular ecology resources 16 (2), 434-445, 2016 | 75 | 2016 |
| Adaptation of genetically monomorphic bacteria: evolution of copper resistance through multiple horizontal gene transfers of complex and versatile mobile genetic elements D Richard, V Ravigné, A Rieux, B Facon, C Boyer, K Boyer, P Grygiel, ... Molecular Ecology 26 (7), 2131-2149, 2017 | 63 | 2017 |
| Recurrent mutations in SARS-CoV-2 genomes isolated from mink point to rapid host-adaptation L van Dorp, CCS Tan, SD Lam, D Richard, C Owen, D Berchtold, ... BioRxiv, 2020.11. 16.384743, 2020 | 58 | 2020 |
| Phylogeography of the genus Podococcus (Palmae/Arecaceae) in Central African rain forests: Climate stability predicts unique genetic diversity A Faye, V Deblauwe, C Mariac, D Richard, B Sonké, Y Vigouroux, ... Molecular Phylogenetics and Evolution 105, 126-138, 2016 | 53 | 2016 |
| COVID-19, the first pandemic in the post-genomic era L van Dorp, CJ Houldcroft, D Richard, F Balloux Current Opinion in Virology 50, 40-48, 2021 | 40 | 2021 |
| First Report of Copper-resistant Xanthomonas citri pv. citri Pathotype A Causing Asiatic Citrus Canker in Réunion, France D Richard, N Tribot, C Boyer, M Terville, K Boyer, S Javegny, ... Plant Disease 101 (3), 503, 2017 | 39 | 2017 |
| The past, current and future epidemiological dynamic of SARS-CoV-2 F Balloux, C Tan, L Swadling, D Richard, C Jenner, M Maini, L van Dorp Oxford open immunology 3 (1), iqac003, 2022 | 28 | 2022 |
| Complete Genome Sequences of Six Copper-Resistant Xanthomonas Strains Causing Bacterial Spot of Solaneous Plants, Belonging to X. gardneri, X. euvesicatoria, and … D Richard, C Boyer, P Lefeuvre, BI Canteros, S Beni-Madhu, P Portier, ... Genome announcements 5 (8), 10.1128/genomea. 01693-16, 2017 | 28 | 2017 |
| Complete genome sequences of six copper-resistant Xanthomonas citri pv. citri strains causing Asiatic citrus canker, obtained using long-read technology D Richard, C Boyer, C Vernière, BI Canteros, P Lefeuvre, O Pruvost Genome Announcements 5 (12), 10.1128/genomea. 00010-17, 2017 | 23 | 2017 |
| No detectable signal for ongoing genetic recombination in SARS-CoV-2 D Richard, CJ Owen, L van Dorp, F Balloux bioRxiv, 2020.12. 15.422866, 2020 | 22 | 2020 |
| Complete genome sequences of six copper-resistant D Richard, C Boyer, P Lefeuvre, BI Canteros, S Beni-Madhu, P Portier, ... Xanthomonas citri, e00010-17, 2017 | 19 | 2017 |
| A phylogeny-based metric for estimating changes in transmissibility from recurrent mutations in SARS-CoV-2 D Richard, LP Shaw, R Lanfear, R Corbett-Detig, A Hinrichs, J McBroome, ... BioRxiv, 2021.05. 06.442903, 2021 | 15 | 2021 |
| Deciphering how plant pathogenic bacteria disperse and meet: Molecular epidemiology of Xanthomonas citri pv. citri at microgeographic scales in a tropical area … O Pruvost, K Boyer, V Ravigné, D Richard, C Vernière Evolutionary Applications 12 (8), 1523-1538, 2019 | 14 | 2019 |
| Time‐calibrated genomic evolution of a monomorphic bacterium during its establishment as an endemic crop pathogen D Richard, O Pruvost, F Balloux, C Boyer, A Rieux, P Lefeuvre Molecular Ecology 30 (8), 1823-1835, 2021 | 13 | 2021 |
| First Report of Xanthomonas citri pv. citri Pathotype A Causing Asiatic Citrus Canker in Martinique, France D Richard, C Boyer, S Javegny, K Boyer, P Grygiel, O Pruvost, ... Plant Disease 100 (9), 1946-1946, 2016 | 12 | 2016 |
| First historical genome of a crop bacterial pathogen from herbarium specimen: Insights into citrus canker emergence PE Campos, C Groot Crego, K Boyer, M Gaudeul, C Baider, D Richard, ... PLoS Pathogens 17 (7), e1009714, 2021 | 9 | 2021 |
| Genomic screening of 16 UK native bat species through conservationist networks uncovers coronaviruses with zoonotic potential CCS Tan, J Trew, TP Peacock, KY Mok, C Hart, K Lau, D Ni, CDL Orme, ... Nature Communications 14 (1), 3322, 2023 | 7 | 2023 |
