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Sandeep Choubey
Sandeep Choubey
Verified email at imsc.res.in
Title
Cited by
Cited by
Year
Regulation of noise in gene expression
A Sanchez, S Choubey, J Kondev
Annual review of biophysics 42, 469-491, 2013
2012013
Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies
CJ Bashor, N Patel, S Choubey, A Beyzavi, J Kondev, JJ Collins, ...
Science 364 (6440), 593-597, 2019
1252019
Sequence-dependent surface condensation of a pioneer transcription factor on DNA
JA Morin, S Wittmann, S Choubey, A Klosin, S Golfier, AA Hyman, ...
Nature Physics 18 (3), 271-276, 2022
96*2022
Deciphering transcriptional dynamics in vivo by counting nascent RNA molecules
S Choubey, J Kondev, A Sanchez
PLoS computational biology 11 (11), e1004345, 2015
682015
Stochastic models of transcription: From single molecules to single cells
A Sanchez, S Choubey, J Kondev
Methods 62 (1), 13-25, 2013
662013
Dynamics of embryonic stem cell differentiation inferred from single-cell transcriptomics show a series of transitions through discrete cell states
S Jang, S Choubey, L Furchtgott, LN Zou, A Doyle, V Menon, EB Loew, ...
elife 6, e20487, 2017
512017
Effect of transcription factor resource sharing on gene expression noise
D Das, S Dey, RC Brewster, S Choubey
PLOS Computational Biology 13 (4), e1005491, 2017
452017
Nascent RNA kinetics: Transient and steady state behavior of models of transcription
S Choubey
Physical Review E 97 (2), 022402, 2018
312018
Probing mechanisms of transcription elongation through cell-to-cell variability of RNA polymerase
MZ Ali, S Choubey, D Das, RC Brewster
Biophysical Journal 118 (7), 1769-1781, 2020
172020
Inherent regulatory asymmetry emanating from network architecture in a prevalent autoregulatory motif
MZ Ali, V Parisutham, S Choubey, RC Brewster
Elife 9, e56517, 2020
162020
Distribution of initiation times reveals mechanisms of transcriptional regulation in single cells
S Choubey, J Kondev, A Sanchez
Biophysical journal 114 (9), 2072-2082, 2018
152018
Cell-to-cell variability in organelle abundance reveals mechanisms of organelle biogenesis
S Choubey, D Das, S Majumdar
Physical Review E 100 (2), 022405, 2019
112019
Tunability enhancement of gene regulatory motifs through competition for regulatory protein resources
S Das, S Choubey
Physical Review E 102 (5), 052410, 2020
92020
Decoding the grammar of transcriptional regulation from RNA polymerase measurements: models and their applications
MZ Ali, S Choubey
Physical Biology 16 (6), 061001, 2019
82019
Efficacy of information transmission in cellular communication
S Sarkar, MZ Ali, S Choubey
Physical Review Research 5 (1), 013092, 2023
32023
Temporal Regulation of Organelle Biogenesis
S Dixit, N Aniruddha, S Choubey
bioRxiv, 2022.12. 30.522312, 2022
12022
Role of protein-protein interactions on model chromatin organization
P Swain, S Choubey, S Vemparala
bioRxiv, 2024.03. 03.583162, 2024
2024
Decoding the role of DNA sequence on protein-DNA co-condensation
RK Singh, P Swain, M Ganji, S Choubey
bioRxiv, 2024.02. 24.581870, 2024
2024
Multicomponent rendezvous of cofilin, profilin and twinfilin at the actin filament barbed end
Ankita, S Choubey, S Shekhar
arXiv preprint arXiv:2311.06457, 2023
2023
Gene regulation meets Bayesian non-parametrics
S Choubey
Nature Computational Science 3 (2), 126-127, 2023
2023
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