Nir Kalisman
Nir Kalisman
Professor of Life Sciences, The Hebrew University of Jerusalem
Verified email at mail.huji.ac.il - Homepage
Title
Cited by
Cited by
Year
The neocortical microcircuit as a tabula rasa
N Kalisman, G Silberberg, H Markram
Proceedings of the National Academy of Sciences 102 (3), 880-885, 2005
2092005
Synthesis and Characterization of Au102(p-MBA)44 Nanoparticles
Y Levi-Kalisman, PD Jadzinsky, N Kalisman, H Tsunoyama, T Tsukuda, ...
Journal of the American Chemical Society 133 (9), 2976-2982, 2011
1972011
Architecture of an RNA polymerase II transcription pre-initiation complex
K Murakami, H Elmlund, N Kalisman, DA Bushnell, CM Adams, M Azubel, ...
Science 342 (6159), 1238724, 2013
1522013
Subunit order of eukaryotic TRiC/CCT chaperonin by cross-linking, mass spectrometry, and combinatorial homology modeling
N Kalisman, CM Adams, M Levitt
Proceedings of the National Academy of Sciences 109 (8), 2884-2889, 2012
1492012
Deriving physical connectivity from neuronal morphology
N Kalisman, G Silberberg, H Markram
Biological cybernetics 88 (3), 210-218, 2003
702003
Structure of an RNA polymerase II preinitiation complex
K Murakami, KL Tsai, N Kalisman, DA Bushnell, FJ Asturias, RD Kornberg
Proceedings of the National Academy of Sciences 112 (44), 13543-13548, 2015
662015
Consistent refinement of submitted models at CASP using a knowledge‐based potential
G Chopra, N Kalisman, M Levitt
Proteins: Structure, Function, and Bioinformatics 78 (12), 2668-2678, 2010
562010
The crystal structures of the eukaryotic chaperonin CCT reveal its functional partitioning
N Kalisman, GF Schröder, M Levitt
Structure 21 (4), 540-549, 2013
492013
Differentiable, multi‐dimensional, knowledge‐based energy terms for torsion angle probabilities and propensities
EAD Amir, N Kalisman, C Keasar
Proteins: Structure, Function, and Bioinformatics 72 (1), 62-73, 2008
392008
MESHI: a new library of Java classes for molecular modeling
N Kalisman, A Levi, T Maximova, D Reshef, S Zafriri-Lynn, Y Gleyzer, ...
Bioinformatics 21 (20), 3931-3932, 2005
352005
Archaeal flagellin combines a bacterial type IV pilin domain with an Ig-like domain
T Braun, MR Vos, N Kalisman, NE Sherman, R Rachel, R Wirth, ...
Proceedings of the National Academy of Sciences 113 (37), 10352-10357, 2016
242016
First community-wide, comparative cross-linking mass spectrometry study
C Iacobucci, C Piotrowski, R Aebersold, BC Amaral, P Andrews, K Bernfur, ...
Analytical chemistry 91 (11), 6953-6961, 2019
172019
Structure‐based identification of catalytic residues
R Yahalom, D Reshef, A Wiener, S Frankel, N Kalisman, B Lerner, ...
Proteins: Structure, Function, and Bioinformatics 79 (6), 1952-1963, 2011
132011
Integrative structure modeling: overview and assessment
M Braitbard, D Schneidman-Duhovny, N Kalisman
Annual review of biochemistry 88, 113-135, 2019
92019
Structure of the human core centromeric nucleosome complex
PK Allu, JM Dawicki-McKenna, T Van Eeuwen, M Slavin, M Braitbard, ...
Current Biology 29 (16), 2625-2639. e5, 2019
72019
Prediction of structural stability of short beta-hairpin peptides by molecular dynamics and knowledge-based potentials
K Noy, N Kalisman, C Keasar
BMC structural biology 8 (1), 27, 2008
72008
Insights into the intra-ring subunit order of tric/cct: A structural and evolutionary analysis
N Kalisman, M Levitt
Biocomputing 2010, 252-259, 2010
52010
Def1 interacts with TFIIH and modulates RNA polymerase II transcription
N Damodaren, T Van Eeuwen, J Zamel, E Lin-Shiao, N Kalisman, ...
Proceedings of the National Academy of Sciences 114 (50), 13230-13235, 2017
42017
Structural analysis of protein complexes by cross-linking and mass spectrometry
M Slavin, N Kalisman
Protein Complex Assembly, 173-183, 2018
32018
Cross-linking/mass spectrometry: a community-wide, comparative study towards establishing best practice guidelines
C Iacobucci, C Piotrowski, R Aebersold, BC Amaral, P Andrews, ...
bioRxiv, 424697, 2018
22018
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