|The genomics of speciation-with-gene-flow|
JL Feder, SP Egan, P Nosil
Trends in genetics 28 (7), 342-350, 2012
|Heterogeneous genomic differentiation between walking‐stick ecotypes:“isolation by adaptation” and multiple roles for divergent selection|
P Nosil, SP Egan, DJ Funk
Evolution: International Journal of Organic Evolution 62 (2), 316-336, 2008
|Stick insect genomes reveal natural selection’s role in parallel speciation|
V Soria-Carrasco, Z Gompert, AA Comeault, TE Farkas, TL Parchman, ...
Science 344 (6185), 738-742, 2014
|Conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA|
DM Lodge, CR Turner, CL Jerde, MA Barnes, L Chadderton, SP Egan, ...
Molecular ecology 21 (11), 2555-2558, 2012
|Selection and genomic differentiation during ecological speciation: isolating the contributions of host association via a comparative genome scan of Neochlamisus bebbianae leaf …|
SP Egan, P Nosil, DJ Funk
Evolution: International Journal of Organic Evolution 62 (5), 1162-1181, 2008
|Developmental trajectories of gene expression reveal candidates for diapause termination: a key life-history transition in the apple maggot fly Rhagoletis pomonella|
GJ Ragland, SP Egan, JL Feder, SH Berlocher, DA Hahn
Journal of Experimental Biology 214 (23), 3948-3960, 2011
|Environmental DNA (eDNA) detects the invasive rusty crayfish Orconectes rusticus at low abundances|
MM Dougherty, ER Larson, MA Renshaw, CA Gantz, SP Egan, ...
Journal of Applied Ecology 53 (3), 722-732, 2016
|Geographic mode of speciation and genomic divergence|
JL Feder, SM Flaxman, SP Egan, AA Comeault, P Nosil
Annual Review of Ecology, Evolution, and Systematics 44, 73-97, 2013
|Host plant quality and local adaptation determine the distribution of a gall‐forming herbivore|
SP Egan, JR Ott
Ecology 88 (11), 2868-2879, 2007
|Experimental evidence of genome‐wide impact of ecological selection during early stages of speciation‐with‐gene‐flow|
SP Egan, GJ Ragland, L Assour, THQ Powell, GR Hood, S Emrich, ...
Ecology letters 18 (8), 817-825, 2015
|Individual advantages to ecological specialization: insights on cognitive constraints from three conspecific taxa|
SP Egan, DJ Funk
Proceedings of the Royal Society B: Biological Sciences 273 (1588), 843-848, 2006
|Risk analysis and bioeconomics of invasive species to inform policy and management|
DM Lodge, PW Simonin, SW Burgiel, RP Keller, JM Bossenbroek, ...
Annual Review of Environment and Resources 41, 2016
|Ecologically dependent postmating isolation between sympatric host forms of Neochlamisus bebbianae leaf beetles|
SP Egan, DJ Funk
Proceedings of the National Academy of Sciences 106 (46), 19426-19431, 2009
|Patterns of Genomic Differentiation between Ecologically Differentiated M and S Forms of Anopheles gambiae in West and Central Africa|
KR Reidenbach, DE Neafsey, C Costantini, NF Sagnon, F Simard, ...
Genome biology and evolution 4 (12), 1202-1212, 2012
|Sequential divergence and the multiplicative origin of community diversity|
GR Hood, AA Forbes, THQ Powell, SP Egan, G Hamerlinck, JJ Smith, ...
Proceedings of the National Academy of Sciences 112 (44), E5980-E5989, 2015
|Evidence for a recent horizontal transmission and spatial spread of W olbachia from endemic R hagoletis cerasi (D iptera: T ephritidae) to invasive R hagoletis cingulata in E urope|
H Schuler, C Bertheau, SP Egan, JL Feder, M Riegler, BC Schlick‐Steiner, ...
Molecular Ecology 22 (15), 4101-4111, 2013
|Isolation by adaptation in Neochlamisus leaf beetles: host‐related selection promotes neutral genomic divergence|
DJ Funk, SP Egan, P Nosil
Molecular Ecology 20 (22), 4671-4682, 2011
|Rapid molecular detection of invasive species in ballast and harbor water by integrating environmental DNA and light transmission spectroscopy|
SP Egan, E Grey, B Olds, JL Feder, ST Ruggiero, CE Tanner, DM Lodge
Environmental Science & Technology 49 (7), 4113-4121, 2015
|Rapid invasive species detection by combining environmental DNA with light transmission spectroscopy|
SP Egan, MA Barnes, CT Hwang, AR Mahon, JL Feder, ST Ruggiero, ...
Conservation Letters 6 (6), 402-409, 2013
|Environmental DNA (eDNA) detects the invasive crayfishes Orconectes rusticus and Pacifastacus leniusculus in large lakes of North America|
ER Larson, MA Renshaw, CA Gantz, J Umek, S Chandra, DM Lodge, ...
Hydrobiologia 800 (1), 173-185, 2017