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Gasper Tkacik
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Year
Information-based clustering
N Slonim, GS Atwal, G Tkačik, W Bialek
Proceedings of the National Academy of Sciences 102 (51), 18297-18302, 2005
2802005
Information flow and optimization in transcriptional regulation
G Tkačik, CG Callan Jr, W Bialek
Proceedings of the National Academy of Sciences 105 (34), 12265-12270, 2008
2772008
Searching for collective behavior in a large network of sensory neurons
G Tkačik, O Marre, D Amodei, E Schneidman, W Bialek, MJ Berry
PLoS computational biology 10 (1), e1003408, 2014
2362014
Thermodynamics and signatures of criticality in a network of neurons
G Tkačik, T Mora, O Marre, D Amodei, SE Palmer, MJ Berry, W Bialek
Proceedings of the National Academy of Sciences 112 (37), 11508-11513, 2015
220*2015
The formation of the Bicoid morphogen gradient requires protein movement from anteriorly localized mRNA
SC Little, G Tkačik, TB Kneeland, EF Wieschaus, T Gregor
PLoS biology 9 (3), e1000596, 2011
1912011
Information transmission in genetic regulatory networks: a review
G Tkačik, AM Walczak
Journal of Physics: Condensed Matter 23 (15), 153102, 2011
1852011
Optimal population coding by noisy spiking neurons
G Tkačik, JS Prentice, V Balasubramanian, E Schneidman
Proceedings of the National Academy of Sciences 107 (32), 14419-14424, 2010
1832010
Positional information, in bits
JO Dubuis, G Tkačik, EF Wieschaus, T Gregor, W Bialek
Proceedings of the National Academy of Sciences 110 (41), 16301-16308, 2013
1692013
Biased partitioning of the multidrug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity
T Bergmiller, AMC Andersson, K Tomasek, E Balleza, DJ Kiviet, ...
Science 356 (6335), 311-315, 2017
1472017
Optimizing information flow in small genetic networks
G Tkačik, AM Walczak, W Bialek
Physical Review E 80 (3), 031920, 2009
144*2009
The simplest maximum entropy model for collective behavior in a neural network
G Tkačik, O Marre, T Mora, D Amodei, MJ Berry II, W Bialek
Journal of Statistical Mechanics: Theory and Experiment 2013 (03), P03011, 2013
1412013
Information processing in living systems
G Tkačik, W Bialek
Annual Review of Condensed Matter Physics 7, 89-117, 2016
1382016
The dynamics of adaptation on correlated fitness landscapes
S Kryazhimskiy, G Tkačik, JB Plotkin
Proceedings of the National Academy of Sciences 106 (44), 18638-18643, 2009
1332009
Ising models for networks of real neurons
G Tkacik, E Schneidman, II Berry, J Michael, W Bialek
Arxiv preprint q-bio/0611072, 2006
130*2006
Information capacity of genetic regulatory elements
G Tkačik, CG Callan Jr, W Bialek
Physical Review E 78 (1), 011910, 2008
1212008
Optimizing information flow in small genetic networks. II. Feed-forward interactions
AM Walczak, G Tkačik, W Bialek
Physical Review E 81 (4), 041905, 2010
1142010
Stimulus-dependent maximum entropy models of neural population codes
E Granot-Atedgi, G Tkačik, R Segev, E Schneidman
PLoS computational biology 9 (3), e1002922, 2013
1102013
Decoding of position in the developing neural tube from antiparallel morphogen gradients
M Zagorski, Y Tabata, N Brandenberg, MP Lutolf, G Tkačik, T Bollenbach, ...
Science 356 (6345), 1379-1383, 2017
1082017
Optimal decoding of cellular identities in a genetic network
MD Petkova, G Tkačik, W Bialek, EF Wieschaus, T Gregor
Cell 176 (4), 844-855. e15, 2019
1072019
The role of input noise in transcriptional regulation
G Tkačik, T Gregor, W Bialek
PloS one 3 (7), e2774, 2008
1072008
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Articles 1–20