Alexander Vologodskii
Alexander Vologodskii
Freelance science writer
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Cited by
Cited by
Probability of DNA knotting and the effective diameter of the DNA double helix
VV Rybenkov, NR Cozzarelli, AV Vologodskii
Proceedings of the National Academy of Sciences 90 (11), 5307-5311, 1993
Conformational and thermodynamic properties of supercoiled DNA
AV Vologodskii, NR Cozzarelli
Annual review of biophysics and biomolecular structure 23 (1), 609-643, 1994
Conformational and thermodynamic properties of supercoiled DNA
AV Vologodskii, SD Levene, KV Klenin, M Frank-Kamenetskii, ...
Journal of molecular biology 227 (4), 1224-1243, 1992
Simplification of DNA topology below equilibrium values by type II topoisomerases
VV Rybenkov, C Ullsperger, AV Vologodskii, NR Cozzarelli
Science 277 (5326), 690-693, 1997
Cyclization of short DNA fragments and bending fluctuations of the double helix
Q Du, C Smith, N Shiffeldrim, M Vologodskaia, A Vologodskii
Proceedings of the National Academy of Sciences 102 (15), 5397-5402, 2005
The knot problem in statistical mechanics of polymer chains
AV Vologodskiǐ, AV Lukashin, MD Kamenetskiǐ, VV Anshelevich
Soviet Journal of Experimental and Theoretical Physics 39, 1059, 1974
Positive torsional strain causes the formation of a four-way junction at replication forks
L Postow, C Ullsperger, RW Keller, C Bustamante, AV Vologodskii, ...
Journal of Biological Chemistry 276 (4), 2790-2796, 2001
Statistical mechanics and topology of polymer chains
MD Frank-Kamenetskii, AV Lukashin, AV Vologodskii
Nature 258 (5534), 398-402, 1975
Sequence dependence of DNA bending rigidity
S Geggier, A Vologodskii
Proceedings of the National Academy of Sciences 107 (35), 15421-15426, 2010
The kinetics of oligonucleotide replacements
LP Reynaldo, AV Vologodskii, BP Neri, VI Lyamichev
Journal of molecular biology 297 (2), 511-520, 2000
Chirality sensing by Escherichia coli topoisomerase IV and the mechanism of type II topoisomerases
MD Stone, Z Bryant, NJ Crisona, SB Smith, A Vologodskii, C Bustamante, ...
Proceedings of the National Academy of Sciences 100 (15), 8654-8659, 2003
Topology and Physics of Circular Dnafrom the Series
A Vologodskii
CRC Press, 1992
The flexibility of DNA double crossover molecules
P Sa-Ardyen, AV Vologodskii, NC Seeman
Biophysical journal 84 (6), 3829-3837, 2003
Torsional and bending rigidity of the double helix from data on small DNA rings
MD Frank-Kamenetskii, AV Lukashin, VV Anshelevich, AV Vologodskii
Journal of Biomolecular Structure and Dynamics 2 (5), 1005-1012, 1985
Mechanism of topology simplification by type II DNA topoisomerases
AV Vologodskii, W Zhang, VV Rybenkov, AA Podtelezhnikov, ...
Proceedings of the National Academy of Sciences 98 (6), 3045-3049, 2001
The effect of ionic conditions on DNA helical repeat, effective diameter and free energy of supercoiling
VV Rybenkov, AV Vologodskii, NR Cozzarelli
Nucleic acids research 25 (7), 1412-1418, 1997
A combined wormlike-chain and bead model for dynamic simulations of long linear DNA
H Jian, AV Vologodskii, T Schlick
Journal of Computational Physics 136 (1), 168-179, 1997
Computer simulation of DNA supercoiling
KV Klenin, AV Vologodskii, VV Anshelevich, AM Dykhne, ...
Journal of molecular biology 217 (3), 413-419, 1991
Tightness of random knotting
V Katritch, WK Olson, A Vologodskii, J Dubochet, A Stasiak
Physical Review E 61 (5), 5545, 2000
Statistical mechanics of supercoils and the torsional stiffness of the DNA double helix
AV Vologodskii, VV Anshelevich, AV Lukashin, MD Frank-Kamenetskii
Nature 280 (5720), 294-298, 1979
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